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qs_7_scaffold_3315

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_3315_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..420
DNA (420bp) protein (140aa)
Ribosome maturation factor RimM n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG4_RHOM4
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_7_scaffold_3315_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

524..1420
DNA (897bp) protein (299aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4C3CB
qs_7_scaffold_3315_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1482..1829
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG6_RHOM4
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_7_scaffold_3315_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1938..2786
DNA (849bp) protein (283aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=309807 species=
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9P1_SALRM
hypothetical protein
qs_7_scaffold_3315_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2844..3299
DNA (456bp) protein (152aa)
single-stranded DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B6935F
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_7_scaffold_3315_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3479..4702
DNA (1224bp) protein (408aa)
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=24659582 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
tyrS; tyrosyl-tRNA synthetase
qs_7_scaffold_3315_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4737..5033)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037BD0FE
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ACV47265.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_7_scaffold_3315_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5074..5457)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36440.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
qs_7_scaffold_3315_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5595..6131)
DNA (537bp) protein (179aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Salisaeta longa RepID=UPI0003B73777
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
qs_7_scaffold_3315_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6174..7166)
DNA (993bp) protein (331aa)
Phosphoribosylaminoimidazole carboxylase ATPase-subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N6_SALRM
purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
qs_7_scaffold_3315_11
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(7345..7689)
DNA (345bp) protein (115aa)
MazE/toxin transcriptional modulator MazF; K07171 id=8266192 bin=CD_OP8_4m species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
PemK-like protein Tax=Caldatribacterium californiense
MazF; growth inhibitor
qs_7_scaffold_3315_12
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7683..7922)
DNA (240bp) protein (80aa)
Growth regulator n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X0B1_9NOST
transcriptional regulator/antitoxin MazE; K07172 antitoxin Tax=CG_Syntroph_01
growth regulator
qs_7_scaffold_3315_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7992..8435)
DNA (444bp) protein (148aa)
Ftsk/spoiiie family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S242_SALRD
ftsK; ftsk/SpoIIIE family protein
Ftsk/spoiiie family protein {ECO:0000313|EMBL:ABC45138.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_7_scaffold_3315_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8383..9186)
DNA (804bp) protein (268aa)
Cell divisionFtsK/SpoIIIE n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJN2_RHOM4
cell division protein FtsK
Cell divisionFtsK/SpoIIIE {ECO:0000313|EMBL:ACY48690.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_7_scaffold_3315_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9156..10481)
DNA (1326bp) protein (442aa)
ftsK; DNA translocase ftsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=24659578 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
cell division protein FtsK
Cell divisionFtsK/SpoIIIE {ECO:0000313|EMBL:ACY48690.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_7_scaffold_3315_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10928..11683)
DNA (756bp) protein (252aa)
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
2-phosphosulfolactate phosphatase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH9_RHOMR
2-phosphosulfolactate phosphatase
qs_7_scaffold_3315_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11894..13003)
DNA (1110bp) protein (370aa)
gcvT; aminomethyltransferase; K00605 aminomethyltransferase [EC:2.1.2.10] id=24659576 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
glycine cleavage system T protein
Displaying 17 items

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