ggKbase home page

qs_7_scaffold_2170

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_2170_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

qs_7_scaffold_2170_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(167..436)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Salisaeta longa RepID=UPI0003B52839
rpS; 30S ribosomal protein S14
30S ribosomal protein S14; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;
qs_7_scaffold_2170_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(478..1251)
DNA (774bp) protein (258aa)
rplE; 50S ribosomal protein L5
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=24658970 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qs_7_scaffold_2170_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(1509..1844)
DNA (336bp) protein (112aa)
50S ribosomal protein L24 n=2 Tax=Rhodothermus marinus RepID=D0MGW5_RHOM4
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_7_scaffold_2170_5
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(1948..2316)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Salisaeta longa RepID=UPI0003B72D40
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; So
qs_7_scaffold_2170_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2410..2949)
DNA (540bp) protein (180aa)
30S ribosomal protein S17 n=1 Tax=Spirosoma spitsbergense RepID=UPI0003755CA3
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_7_scaffold_2170_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2961..3164)
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGW2_RHOM4
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_7_scaffold_2170_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(3278..3721)
DNA (444bp) protein (148aa)
50S ribosomal protein L16 n=1 Tax=Salisaeta longa RepID=UPI0003B5FDE9
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_7_scaffold_2170_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(3827..4531)
DNA (705bp) protein (235aa)
30S ribosomal protein S3 n=1 Tax=Salisaeta longa RepID=UPI0003B49528
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_7_scaffold_2170_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(4609..4983)
DNA (375bp) protein (125aa)
50S ribosomal protein L22 n=2 Tax=Rhodothermus marinus RepID=D0MGV9_RHOM4
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_7_scaffold_2170_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(5061..5432)
DNA (372bp) protein (124aa)
30S ribosomal protein S19 n=2 Tax=Salinibacter ruber RepID=RS19_SALRD
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531, ECO:0000313|EMBL:CBH24161.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_7_scaffold_2170_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(5433..6269)
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Salisaeta longa RepID=UPI0003B791FF
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000313|EMBL:CBH24160.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_7_scaffold_2170_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(6366..6665)
DNA (300bp) protein (100aa)
rplW; 50S ribosomal protein L23
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24658960 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_7_scaffold_2170_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(6767..7402)
DNA (636bp) protein (212aa)
50S ribosomal protein L4 n=1 Tax=Salisaeta longa RepID=UPI0003B69FCC
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_7_scaffold_2170_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(7491..8129)
DNA (639bp) protein (213aa)
50S ribosomal protein L3 n=1 Tax=Salisaeta longa RepID=UPI0003B4A252
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qs_7_scaffold_2170_16
unknown

Not on your lists

comp(8174..8758)
DNA (585bp) protein (195aa)

This feature has no annotations

qs_7_scaffold_2170_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(8755..9066)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Salisaeta longa RepID=UPI0003B475B2
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_7_scaffold_2170_18
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(9151..9282)
DNA (132bp) protein (44aa)
Elongation factor Tu n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T418_THEA1
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales;
qs_7_scaffold_2170_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9282..10280)
DNA (999bp) protein (333aa)
elongation factor Tu n=1 Tax=Salisaeta longa RepID=UPI0003B38A18
tuf; translation elongation factor EF-Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
qs_7_scaffold_2170_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10380..12236)
DNA (1857bp) protein (619aa)
elongation factor P n=1 Tax=Salisaeta longa RepID=UPI0003B6E354
fusA; translation elongation factor G (EF-G)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Displaying 20 items

View Taxonomy