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qs_7_scaffold_4353

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_4353_1

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comp(202..2550)
DNA (2349bp) protein (783aa)
Cadherin n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UJI3_CYAP2
polymorphic outer membrane protein
Marine sediment metagenome DNA, contig: S01H1_C00244 {ECO:0000313|EMBL:GAF74291.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
qs_7_scaffold_4353_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3675..4193)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B52A80
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25445.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_7_scaffold_4353_trna_1
unknown

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comp(4533..4605)
DNA (73bp)
transferRNA
qs_7_scaffold_4353_3
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4719..5684)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000371DB9B
Gluconolactonase {ECO:0000313|EMBL:AFZ16004.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 71
gluconolactonase
qs_7_scaffold_4353_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5856..7424)
DNA (1569bp) protein (523aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000313|EMBL:CBH25561.1}; EC=1.1.1.34 {ECO:0000313|EMBL:CBH25561.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
hydroxymethylglutaryl-CoA reductase n=1 Tax=Salisaeta longa RepID=UPI0003B6943F
hmgA; 3-hydroxy-3-methylglutaryl coenzyme A reductase
qs_7_scaffold_4353_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7584..8651)
DNA (1068bp) protein (356aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] id=24659087 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order
ruvB; Holliday junction DNA helicase RuvB
qs_7_scaffold_4353_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8929..9315
DNA (387bp) protein (129aa)
RNA polymerase sigma54 factor n=1 Tax=Salisaeta longa RepID=UPI0003B65135
RNA polymerase sigma-54 subunit RpoN
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:ACY49526.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_7_scaffold_4353_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9390..10475
DNA (1086bp) protein (362aa)
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ABC45404.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
rpoN; RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor id=24659088 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_7_scaffold_4353_8
unknown

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10646..10786
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 9 items

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