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qs_7_scaffold_1417

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_1417_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..296
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B66529
Generic methyltransferase {ECO:0000313|EMBL:EZP72115.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
putative phospholipid N-methyltransferase
qs_7_scaffold_1417_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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724..1128
DNA (405bp) protein (135aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=2 Tax=Salinibacter ruber RepID=D5HAI2_SALRM
tpiA; triosephosphate isomerase
qs_7_scaffold_1417_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1558..2988
DNA (1431bp) protein (477aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase n=1 Tax=Salisaeta longa RepID=UPI0003B46D83
hemA; glutamyl-tRNA reductase
qs_7_scaffold_1417_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3376..3882
DNA (507bp) protein (169aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:CBH24673.1}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:C
porphobilinogen deaminase n=1 Tax=Salisaeta longa RepID=UPI0003B7650C
hemC; porphobilinogen deaminase
qs_7_scaffold_1417_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3962..4765
DNA (804bp) protein (268aa)
hemD; uroporphyrinogen-III synthase; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] id=24659505 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:ABC46053.1}; EC=4.2.1.75 {ECO:0000313|EMBL:ABC46053.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
hemD; uroporphyrinogen-III synthase
qs_7_scaffold_1417_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4753..5394)
DNA (642bp) protein (214aa)
Thiamine-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000255|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000255|HAMAP-Rule:MF
Thiamine-phosphate synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=THIE_SALRD
thiE; thiamine-phosphate pyrophosphorylase
qs_7_scaffold_1417_7
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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5552..6520
DNA (969bp) protein (323aa)
hypothetical protein id=24524839 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
qs_7_scaffold_1417_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6538..7863
DNA (1326bp) protein (442aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:AEN73834.1}; EC=2.7.1.31 {ECO:0000313|EMBL:AEN73834.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
Glycerate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJG2_RHOMR
qs_7_scaffold_1417_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8026..9075)
DNA (1050bp) protein (350aa)
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:CBH24335.1}; EC=2.5.1.- {ECO:0000313|EMBL:CBH24335.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
Octaprenyl-diphosphate synthase n=2 Tax=Salinibacter ruber RepID=D5H8I0_SALRM
ispB; octaprenyl-diphosphate synthase
qs_7_scaffold_1417_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9259..10287)
DNA (1029bp) protein (343aa)
Hemin ABC transporter, permease protein, putative n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8I2_SALRM
Hemin ABC transporter, permease protein
Hemin ABC transporter, permease protein, putative {ECO:0000313|EMBL:CBH24337.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_7_scaffold_1417_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10383..11348)
DNA (966bp) protein (322aa)
Periplasmic binding protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S381_SALRD
periplasmic binding protein
Periplasmic binding protein, putative {ECO:0000313|EMBL:ABC45029.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qs_7_scaffold_1417_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11526..12932
DNA (1407bp) protein (469aa)
Fis family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B4F3A4
rrp; response regulatory protein
Member of the two-component regulatory system atoS/atoC {ECO:0000313|EMBL:CBH24336.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_7_scaffold_1417_13
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13032..13886
DNA (855bp) protein (285aa)
restriction endonuclease or methylase n=1 Tax=Salisaeta longa RepID=UPI0003B3AFB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET65302.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Displaying 13 items

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