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qs_7_scaffold_2196

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_2196_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..364
DNA (363bp) protein (121aa)
50S ribosomal protein L15 n=1 Tax=Salisaeta longa RepID=UPI0003B514E2
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_7_scaffold_2196_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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459..1784
DNA (1326bp) protein (442aa)
preprotein translocase subunit SecY n=1 Tax=Salisaeta longa RepID=UPI0003B63FAD
secY; Preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qs_7_scaffold_2196_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1878..2768
DNA (891bp) protein (297aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase n=1 Tax=Salisaeta longa RepID=UPI0003B6D19B
qs_7_scaffold_2196_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2831..3049
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=24658979 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_7_scaffold_2196_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3380..3649
DNA (270bp) protein (90aa)
30S ribosomal protein S13 n=1 Tax=Salisaeta longa RepID=UPI0003B72DBC
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_7_scaffold_2196_6
unknown

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3749..3952
DNA (204bp) protein (68aa)

This feature has no annotations

qs_7_scaffold_2196_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3904..4146
DNA (243bp) protein (81aa)
30S ribosomal protein S11
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=24658981 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_7_scaffold_2196_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4228..4830
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Salisaeta longa RepID=UPI0003B6340A
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_7_scaffold_2196_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4963..5952
DNA (990bp) protein (330aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha
qs_7_scaffold_2196_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


6079..6894
DNA (816bp) protein (272aa)
50S ribosomal protein L17 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY2_RHOM4
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_7_scaffold_2196_11
unknown

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7083..8120
DNA (1038bp) protein (346aa)

This feature has no annotations

qs_7_scaffold_2196_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8117..9139
DNA (1023bp) protein (341aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CBH24184.1}; EC=3.1.7.2 {ECO:0000313|EMBL:CBH24184.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H829_SALRM
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Displaying 12 items

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