ggKbase home page

qs_7_scaffold_903

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_903_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..1146)
DNA (1146bp) protein (382aa)
excinuclease ABC subunit A n=1 Tax=Salisaeta longa RepID=UPI0003B73FD8
uvrA; excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_7_scaffold_903_2
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(1295..1603)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-O17 RepID=UPI000374E374
hypothetical protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
qs_7_scaffold_903_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1946..4108
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBZ9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_7_scaffold_903_4
unknown

Not on your lists

comp(4323..4841)
DNA (519bp) protein (173aa)

This feature has no annotations

qs_7_scaffold_903_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5132..6637
DNA (1506bp) protein (502aa)
Thrombospondin N-terminal-like domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S185_SALRD
thrombospondin N-terminal-like domain-containing protein
Thrombospondin N-terminal-like domain protein {ECO:0000313|EMBL:ABC44532.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qs_7_scaffold_903_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6929..7609
DNA (681bp) protein (227aa)
metallo-beta-lactamase superfamily protein
metallo-beta-lactamase superfamily protein id=24657864 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UPF0173 metal-dependent hydrolase SRU_1937 {ECO:0000255|HAMAP-Rule:MF_00457}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_7_scaffold_903_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8104..8889)
DNA (786bp) protein (262aa)
ABC transporter n=1 Tax=Salisaeta longa RepID=UPI0003B2F9A8
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH25985.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_7_scaffold_903_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9009..10478)
DNA (1470bp) protein (490aa)
membrane fusion efflux protein
membrane fusion efflux protein; K02005 HlyD family secretion protein id=24658798 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Membrane fusion efflux protein, putative {ECO:0000313|EMBL:ABC44985.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_7_scaffold_903_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10622..12088)
DNA (1467bp) protein (489aa)
transporter n=1 Tax=Salisaeta longa RepID=UPI0003B5FA8C
tolC; outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:CBH25987.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_7_scaffold_903_trna_1
unknown

Not on your lists

comp(12378..12464)
DNA (87bp)
transferRNA
qs_7_scaffold_903_10
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

12998..13357
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000364C36C
Uncharacterized protein {ECO:0000313|EMBL:KER09207.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
5'-nucleotidase
qs_7_scaffold_903_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13608..14363
DNA (756bp) protein (252aa)
ribonuclease 3 (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL47_RHOMR
qs_7_scaffold_903_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14424..15170)
DNA (747bp) protein (249aa)
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2)
GMP synthase-Glutamine amidotransferase domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWL3_9BACT
qs_7_scaffold_903_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(15243..16034)
DNA (792bp) protein (264aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RBG_16_Chloroflexi_68_14_curated
hydroxymethylpyrimidine kinase (EC:2.7.4.7)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00030FAE2B
qs_7_scaffold_903_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16351..19188
DNA (2838bp) protein (946aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711, ECO:0000313|EMBL:CBH24367.1};; Glycine cleavage system P-protein {ECO:0000256|HA
glycine dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B3C4D5
gcvP; glycine dehydrogenase
qs_7_scaffold_903_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19279..19623)
DNA (345bp) protein (115aa)
4Fe-4S ferredoxin n=1 Tax=Salisaeta longa RepID=UPI0003B3F9B4
ferredoxin
Ferredoxin {ECO:0000313|EMBL:CBH23238.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8)
qs_7_scaffold_903_16
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19864..20058
DNA (195bp) protein (65aa)
Putative stress response protein {ECO:0000313|EMBL:CCM64453.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
qs_7_scaffold_903_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20272..20727)
DNA (456bp) protein (152aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Holliday junction DNA helicase RuvB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H892_SALRM
ruvB; Holliday junction DNA helicase RuvB
Displaying 18 items

View Taxonomy