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qs_7_scaffold_6224

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_6224_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..260
DNA (258bp) protein (86aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF2G_NATPD
tif2g; translation initiation factor IF-2 subunit gamma
Translation initiation factor 2 subunit gamma {ECO:0000255|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; TaxID=348780 species="Arch
qs_7_scaffold_6224_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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260..712
DNA (453bp) protein (151aa)
nucleotide binding protein PINc n=1 Tax=Halorubrum sp. T3 RepID=UPI00037DEC13
Vapc superfamily-like protein {ECO:0000313|EMBL:ELZ34790.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense
PilT N-term./Vapc superfamily-like protein
qs_7_scaffold_6224_3
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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714..1292
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ELZ22092.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ22092.1};; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CIA7_9EURY
qs_7_scaffold_6224_4

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1292..1489
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y1B5_9ARCH
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
DNA-directed RNA polymerase subunit E
qs_7_scaffold_6224_5

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1674..2000
DNA (327bp) protein (109aa)
Uncharacterized protein conserved in archaea n=1 Tax=uncultured archaeon A07HR67 RepID=V4XRE6_9ARCH
UPF0218 protein A07HR67_00630 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qs_7_scaffold_6224_6
unknown

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2517..2897
DNA (381bp) protein (127aa)

This feature has no annotations

qs_7_scaffold_6224_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3231..3968)
DNA (738bp) protein (246aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JNB7_9EURY
3-beta hydroxysteroid dehydrogenase/isomerase family protein {ECO:0000313|EMBL:EMA10491.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
3-beta hydroxysteroid dehydrogenase/isomerase family protein
qs_7_scaffold_6224_8
unknown

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comp(4116..4397)
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 8 items

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