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qs_8_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_173_1
unknown

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

qs_8_scaffold_173_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(761..1165)
DNA (405bp) protein (135aa)
Transmembrane protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XE56_9BACT
Transmembrane protein {ECO:0000313|EMBL:EEF61947.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosp
transmembrane prediction
qs_8_scaffold_173_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1297..2742)
DNA (1446bp) protein (482aa)
polysulfide reductase NrfD n=1 Tax=Schlesneria paludicola RepID=UPI00029AD9F2
polysulfide reductase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
polysulfide reductase
qs_8_scaffold_173_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2990..3328)
DNA (339bp) protein (113aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG37_NITHX
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:ABE64810.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
qs_8_scaffold_173_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3294..6455)
DNA (3162bp) protein (1054aa)
molybdopterin oxidoreductase, iron-sulfur binding subunit; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Fe-S-cluster-containing hydrogenase subunit n=2 Tax=Singulisphaera acidiphila RepID=L0DGI6_SINAD
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
qs_8_scaffold_173_6
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6573..7253)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003724925
chaperone protein HtpG
Chaperone protein HtpG {ECO:0000313|EMBL:ENO13034.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanha
qs_8_scaffold_173_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7376..7783)
DNA (408bp) protein (136aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG34_RHOM4
methylglyoxal synthase
qs_8_scaffold_173_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7879..9216)
DNA (1338bp) protein (446aa)
recD; deoxyribonuclease; K01144 exodeoxyribonuclease V [EC:3.1.11.5] id=24657801 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative deoxyribonuclease {ECO:0000313|EMBL:CBH24032.1}; EC=3.1.11.5 {ECO:0000313|EMBL:CBH24032.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
recD; deoxyribonuclease
qs_8_scaffold_173_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9311..10216)
DNA (906bp) protein (302aa)
alsR; AlsR family transcriptional regulator
alsR; AlsR family transcriptional regulator id=24658511 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HTH-type transcriptional regulator alsR {ECO:0000313|EMBL:CBH25703.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_8_scaffold_173_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10409..10885
DNA (477bp) protein (159aa)
hypothetical protein
hypothetical protein id=24658224 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25428.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_173_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10981..11661)
DNA (681bp) protein (227aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629, ECO:0000313|EMBL:CBH23551.1};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_0
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H696_SALRM
pdxH; pyridoxamine 5'-phosphate oxidase
qs_8_scaffold_173_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11761..12459)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H697_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23552.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_173_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12821..13957
DNA (1137bp) protein (379aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEC2_RHOMR
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:AEN72114.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothe
qs_8_scaffold_173_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14166..15059
DNA (894bp) protein (298aa)
proline dehydrogenase superfamily protein; K00318 proline dehydrogenase [EC:1.5.99.8] id=24657396 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Proline dehydrogenase superfamily {ECO:0000313|EMBL:ABC44240.1}; EC=1.5.99.8 {ECO:0000313|EMBL:ABC44240.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
proline dehydrogenase superfamily protein
qs_8_scaffold_173_15
unknown

Not on your lists

15397..15618
DNA (222bp) protein (74aa)

This feature has no annotations

qs_8_scaffold_173_16
unknown

Not on your lists

15720..16064
DNA (345bp) protein (115aa)

This feature has no annotations

qs_8_scaffold_173_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16190..18889)
DNA (2700bp) protein (900aa)
Glycosyl transferase, family 51 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7N2_ACISJ
glycosyl transferase family protein
Glycosyl transferase, family 51 {ECO:0000313|EMBL:ABM42257.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
qs_8_scaffold_173_18
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19638..20204
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B74034
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH46699.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
qs_8_scaffold_173_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20213..21265)
DNA (1053bp) protein (351aa)
transporter n=1 Tax=Salisaeta longa RepID=UPI0003B6F84C
Formate/nitrite transporter {ECO:0000313|EMBL:EMA50882.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
hypothetical protein
qs_8_scaffold_173_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21316..21660)
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH24235.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
hypothetical protein id=24659077 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_8_scaffold_173_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21812..23494
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3H3_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45224.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_173_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23590..24300)
DNA (711bp) protein (237aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:M
protein-L-isoaspartate O-methyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B3A5FE
pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase
qs_8_scaffold_173_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24410..25273)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25082.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_173_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25392..26384)
DNA (993bp) protein (331aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
Dihydropteroate synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCU3_RHOM4
dihydropteroate synthase
qs_8_scaffold_173_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26548..28116
DNA (1569bp) protein (523aa)
GH3 auxin-responsive promoter superfamily {ECO:0000313|EMBL:CBH25084.1}; EC=6.3.2.- {ECO:0000313|EMBL:CBH25084.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
GH3 auxin-responsive promoter n=1 Tax=Salisaeta longa RepID=UPI0003B4624A
GH3; GH3 auxin-responsive promoter superfamily
qs_8_scaffold_173_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28481..29296
DNA (816bp) protein (272aa)
RNA polymerase sigma-70 factor n=2 Tax=Salinibacter ruber RepID=Q2S172_SALRD
rpoD; RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ABC44590.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_8_scaffold_173_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(29778..30599)
DNA (822bp) protein (274aa)
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phenazine biosynthesis protein PhzF family id=1884744 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PhzF family phenazine biosynthesis protein
qs_8_scaffold_173_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30931..31275
DNA (345bp) protein (115aa)
Thioredoxin n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ76_SALRD
trxA; Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBH25795.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_8_scaffold_173_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31371..32459
DNA (1089bp) protein (363aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
thioredoxin reductase n=1 Tax=Salisaeta longa RepID=UPI0003B71F8D
trxB; thioredoxin-disulfide reductase
qs_8_scaffold_173_30
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32590..33564
DNA (975bp) protein (325aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
peptidoglycan-binding protein LysM n=1 Tax=Salisaeta longa RepID=UPI0003B503B0
Uncharacterized protein {ECO:0000313|EMBL:EOI06378.1}; TaxID=1158609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus moraviensis ATCC BAA
Displaying items 1-30 of 52 in total

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