ggKbase home page

qs_8_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 125 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_261_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2..1522
DNA (1521bp) protein (507aa)
ftsI; cell division protein (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan synthetase FtsI n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTL7_ACIC1
qs_8_scaffold_261_2
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1592..3115
DNA (1524bp) protein (508aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2PZS0_STRC2
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
qs_8_scaffold_261_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3112..4530
DNA (1419bp) protein (473aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporang
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037A67A7
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanylligase
qs_8_scaffold_261_4
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4527..5606
DNA (1080bp) protein (360aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=2 Tax=Frankia sp. (strain CcI3) RepID=MRAY_FRASC
qs_8_scaffold_261_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5603..7060
DNA (1458bp) protein (486aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J0C8_FRASU
UDP-N-acetylmuramoylalanine--D-glutamate ligase
qs_8_scaffold_261_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7050..8267
DNA (1218bp) protein (406aa)
cell division protein FtsW n=1 Tax=Nocardiopsis salina RepID=UPI00034DED1E
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
cell division protein FtsW
qs_8_scaffold_261_7
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8264..9418
DNA (1155bp) protein (385aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q443_9FIRM
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase
qs_8_scaffold_261_8
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9446..10876
DNA (1431bp) protein (477aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037DDAB2
murC; UDP-N-acetylmuramate--L-alanine ligase
qs_8_scaffold_261_9
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10869..11879
DNA (1011bp) protein (337aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RBG_16_Actinobacteria_68_21_curated
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N4U9_SLAHD
UDP-N-acetylenolpyruvoylglucosamine reductase
qs_8_scaffold_261_10
Cryptobacterium curtum, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11903..12715
DNA (813bp) protein (271aa)
Cell division septal protein n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MP03_CRYCD
cell division septal protein
Cell division septal protein {ECO:0000313|EMBL:ACU94643.1}; TaxID=469378 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium.;" source="Cryptobacterium
qs_8_scaffold_261_11
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12913..14043
DNA (1131bp) protein (377aa)
cell division protein FtsZ n=1 Tax=Streptomyces sp. CNY243 RepID=UPI0003610997
Cell division protein FtsZ {ECO:0000313|EMBL:AKH81921.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
ftsZ; cell division protein
qs_8_scaffold_261_12
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14048..14857
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0D0_XYLCX
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
qs_8_scaffold_261_13
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14857..15567
DNA (711bp) protein (237aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3M5_9FIRM
alanine racemase domain-containing protein; K06997 Tax=RBG_13_Deltaproteobacteria_61_14_curated
alanine racemase domain-containing protein
qs_8_scaffold_261_14
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15618..16232
DNA (615bp) protein (205aa)
Cell division protein SepF n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7U1_THECD
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curva
qs_8_scaffold_261_15
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16281..16541
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nocardiopsis kunsanensis RepID=UPI00034C2F84
hypothetical protein; K02221 YggT family protein Tax=RBG_16_Actinobacteria_70_17_curated
hypothetical protein
qs_8_scaffold_261_16
Caenorhabditis remanei, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

16788..17357
DNA (570bp) protein (190aa)
Cellulosome anchoring protein cohesin region n=2 Tax=Clostridium thermocellum RepID=E6UU83_CLOTL
cellulosome anchoring protein cohesin subunit
Putative uncharacterized protein {ECO:0000313|EMBL:EFO92273.1}; TaxID=31234 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhab
qs_8_scaffold_261_17
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17420..17710)
DNA (291bp) protein (97aa)
Alpha-glucosidase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KKR0_9EURY
aglA2; alpha-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:EMA21947.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.
qs_8_scaffold_261_18
unknown

Not on your lists

comp(18015..18635)
DNA (621bp) protein (207aa)

This feature has no annotations

qs_8_scaffold_261_19
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18632..21871)
DNA (3240bp) protein (1080aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTP2_ACIC1
qs_8_scaffold_261_20
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21958..23424
DNA (1467bp) protein (489aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacte
pseudouridine synthase n=1 Tax=Patulibacter americanus RepID=UPI0003B6EE4D
pseudouridine synthase
qs_8_scaffold_261_21
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23467..25113
DNA (1647bp) protein (549aa)
Penicillin-binding protein transpeptidase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YB80_THEBD
penicillin-binding protein transpeptidase
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:ADG88440.1}; Flags: Precursor;; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Ther
qs_8_scaffold_261_22
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


25212..27635
DNA (2424bp) protein (808aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclob
DNA gyrase subunit A n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WXT2_ALIAD
gyrA; DNA gyrase subunit A
qs_8_scaffold_261_23
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

27672..28223
DNA (552bp) protein (184aa)
Nitroreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5J2_SPHTD
nitroreductase Tax=RBG_16_Actinobacteria_68_21_curated
nitroreductase
qs_8_scaffold_261_24
unknown

Not on your lists

28319..28723
DNA (405bp) protein (135aa)

This feature has no annotations

qs_8_scaffold_261_25
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28778..29848)
DNA (1071bp) protein (357aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=690850 species="Bacteria; Proteobact
Transaldolase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YU56_DESAF
Transaldolase
qs_8_scaffold_261_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29845..31842)
DNA (1998bp) protein (666aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transketolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WU51_KYRT2
transketolase
qs_8_scaffold_261_27
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

32089..33087
DNA (999bp) protein (333aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=GWC2_RIF_CHLX_73_18_curated
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) id=4623269 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ctaA; cytochrome C oxidase assembly protein, AA3 subunit-controlling protein
qs_8_scaffold_261_28
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

33084..33986
DNA (903bp) protein (301aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=GWC2_RIF_CHLX_73_18_curated
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) id=4623269 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protoheme IX farnesyltransferase
qs_8_scaffold_261_29
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34032..34835)
DNA (804bp) protein (268aa)
UPI0003D04325 related cluster n=1 Tax=unknown RepID=UPI0003D04325
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
hypothetical protein
qs_8_scaffold_261_30
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34832..35833)
DNA (1002bp) protein (334aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BIE0_SANKS
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ACZ22117.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibac
Displaying items 1-30 of 125 in total

View Taxonomy