ggKbase home page

qs_8_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_110_1
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

298..1314
DNA (1017bp) protein (339aa)
glyceraldehyde 3-phosphate dehydrogenase (NADP+) (EC:1.2.1.13)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcale
Glyceraldehyde 3-phosphate dehydrogenase (NADP+) n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y947_HALP7
qs_8_scaffold_110_2
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1401..2402)
DNA (1002bp) protein (334aa)
thiamine monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7JUY6_CYAP8
qs_8_scaffold_110_3
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2667..3827)
DNA (1161bp) protein (387aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YW16_DACSA
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AFZ51126.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales;
qs_8_scaffold_110_4
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4235..6166
DNA (1932bp) protein (644aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:AFZ43390.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AFZ43390.1};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Ha
Penicillin-binding protein, 1A family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YAG2_HALP7
qs_8_scaffold_110_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(6168..6491)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T5M5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY77723.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_8_scaffold_110_6
unknown

Not on your lists

7085..7180
DNA (96bp) protein (32aa)

This feature has no annotations

qs_8_scaffold_110_7
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

7622..8356
DNA (735bp) protein (245aa)
Demethylmenaquinone methyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T7K8_9CYAN
ubiquinone/menaquinone biosynthesis methyltransferase
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:AFY78862.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_8_scaffold_110_8
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8537..9760
DNA (1224bp) protein (408aa)
membrane protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003499EDD
hypothetical protein
UPF0754 membrane protein PCC8801_0398; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (st
qs_8_scaffold_110_9
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

9760..10227
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3X1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY76816.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_8_scaffold_110_10
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10274..11206)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EJS5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKU97484.1}; Flags: Precursor;; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp
hypothetical protein
qs_8_scaffold_110_11
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11216..11722)
DNA (507bp) protein (169aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZJP2_NODSP
qs_8_scaffold_110_12
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11778..12599)
DNA (822bp) protein (274aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9A0_9CYAN
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KJH72021.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacte
branched-chain amino acid ABC transporter ATPase
qs_8_scaffold_110_13
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12589..13674)
DNA (1086bp) protein (362aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YVT6_DACSA
branched-chain amino acid ABC transporter permease
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:AFZ51041.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcop
qs_8_scaffold_110_14
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13869..15464
DNA (1596bp) protein (532aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W435_9CYAN
qs_8_scaffold_110_15
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16236..16496)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKQ5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20077.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
qs_8_scaffold_110_16
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16493..17158)
DNA (666bp) protein (222aa)
Iron-sulfur cluster biosynthesis transcriptional regulator SufR n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VTA3_9CYAN
Iron-sulfur cluster biosynthesis transcriptional regulator SufR {ECO:0000313|EMBL:EDX74927.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;"
iron-sulfur cluster biosynthesis transcriptional regulator SufR
qs_8_scaffold_110_17
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17318..18763
DNA (1446bp) protein (482aa)
FeS assembly protein SufB n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YV21_DACSA
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:AFZ49973.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 830
qs_8_scaffold_110_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18932..19723
DNA (792bp) protein (264aa)
transporter n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036F7F4B
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AFZ44319.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strai
qs_8_scaffold_110_19
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

19720..21147
DNA (1428bp) protein (476aa)
FeS assembly protein SufD n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TBZ6_9CYAN
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:AFY79656.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_8_scaffold_110_20
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21223..22485
DNA (1263bp) protein (421aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculu
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
Cysteine desulfurase, SufS subfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VT99_9CYAN
qs_8_scaffold_110_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22801..23205
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKW2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20828.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
qs_8_scaffold_110_22
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23491..24195
DNA (705bp) protein (235aa)
Hydrolase, alpha/beta fold family, putative n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VYQ4_9CYAN
Hydrolase, alpha/beta fold family, putative {ECO:0000313|EMBL:EDX73029.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofascic
alpha/beta hydrolase
qs_8_scaffold_110_23
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24272..24742
DNA (471bp) protein (157aa)
Photosystem II protein PsbQ n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YQ09_DACSA
photosystem II protein PsbQ
Photosystem II protein PsbQ {ECO:0000313|EMBL:AFZ49016.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococ
qs_8_scaffold_110_24
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(25042..26046)
DNA (1005bp) protein (335aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2X5_9CYAN
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AFY76763.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_8_scaffold_110_25
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26638..26820
DNA (183bp) protein (61aa)
High light inducible protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XET7_9CHRO
high light inducible protein
High light inducible protein {ECO:0000313|EMBL:AFZ31023.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
qs_8_scaffold_110_26
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26917..27522)
DNA (606bp) protein (202aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XFP2_9CHRO
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AFZ30487.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeoca
qs_8_scaffold_110_27
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

Not on your lists

comp(27766..28098)
DNA (333bp) protein (111aa)
Chromosome undetermined scaffold_110, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BJG0_PARTE
Chromosome undetermined scaffold_110, whole genome shotgun sequence {ECO:0000313|EMBL:CAK58677.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculi
hypothetical protein
qs_8_scaffold_110_28
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28436..29929
DNA (1494bp) protein (498aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YG61_HALP7
qs_8_scaffold_110_29
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

30068..31345
DNA (1278bp) protein (426aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TU44_9CYAN
RND transporter {ECO:0000313|EMBL:KIF17273.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
RND family efflux transporter MFP subunit
qs_8_scaffold_110_30
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(31342..32076)
DNA (735bp) protein (245aa)
DNA replication and repair protein RadC n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WIK8_9CYAN
DNA replication and repair protein RadC
DNA replication and repair protein RadC {ECO:0000313|EMBL:AFZ19372.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PC
Displaying items 1-30 of 52 in total

View Taxonomy