ggKbase home page

qs_8_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 65 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_60_1
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

90..230
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:ACK73477.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synec
qs_8_scaffold_60_2
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(349..1650)
DNA (1302bp) protein (434aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscilla
Homoserine dehydrogenase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WK76_9CYAN
qs_8_scaffold_60_3
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1853..2164)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:AFZ51953.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
qs_8_scaffold_60_4
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2420..2998
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJV1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIF33178.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
qs_8_scaffold_60_5
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3304..3801)
DNA (498bp) protein (166aa)
glutamine-fructose-6-phosphate transaminase (EC:2.6.1.16)
Glucosamine 6-phosphate synthetase n=1 Tax=Moorea producens 3L RepID=F4XJ39_9CYAN
Glucosamine 6-phosphate synthetase {ECO:0000313|EMBL:EGJ35496.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
qs_8_scaffold_60_6
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4153..5604)
DNA (1452bp) protein (484aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=13035 species="Bacteria; Cya
Glutamate--tRNA ligase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUR9_DACSA
glutamyl-tRNA synthetase
qs_8_scaffold_60_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5766..10427)
DNA (4662bp) protein (1554aa)
Glutamate synthase family protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNQ2_9CYAN
glutamate synthase family protein
Glutamate synthase family protein {ECO:0000313|EMBL:AFZ21818.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113
qs_8_scaffold_60_8
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11468..13414
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KAU9_CYAP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK68771.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synec
qs_8_scaffold_60_9
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13560..13976
DNA (417bp) protein (139aa)
mannose-6-phosphate isomerase (EC:5.3.1.8)
mannose-6-phosphate isomerase n=1 Tax=Mastigocladopsis repens RepID=UPI0002FB23E9
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KIJ81260.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
qs_8_scaffold_60_10
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists


14539..14910
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R7X4_9CYAN
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp.
qs_8_scaffold_60_11
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


15071..15541
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YAT2_HALP7
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (s
qs_8_scaffold_60_12
unknown

Not on your lists

15541..15651
DNA (111bp) protein (37aa)

This feature has no annotations

qs_8_scaffold_60_13
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15686..17761
DNA (2076bp) protein (692aa)
Elongation factor G n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YR01_DACSA
translation elongation factor EF-G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcops
qs_8_scaffold_60_14
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17785..19014
DNA (1230bp) protein (410aa)
Elongation factor Tu n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YSN9_DACSA
translation elongation factor TU
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria;
qs_8_scaffold_60_15
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists


19171..19488
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=2 Tax=Cyanobacteria RepID=K9XVY0_STAC7
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;
qs_8_scaffold_60_16
unknown

Not on your lists

19595..19843
DNA (249bp) protein (83aa)

This feature has no annotations

qs_8_scaffold_60_17
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19816..20457
DNA (642bp) protein (214aa)
ATP-dependent protease n=1 Tax=Spirulina subsalsa RepID=UPI00037D4C3A
peptidase S16, lon domain-containing protein
Peptidase S16, lon domain protein {ECO:0000313|EMBL:AFZ21809.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113
qs_8_scaffold_60_18
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20590..21444)
DNA (855bp) protein (285aa)
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscilla
Prephenate dehydratase domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VX13_9CYAN
prephenate dehydratase
qs_8_scaffold_60_19
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

21651..22220
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9X2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY79692.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_8_scaffold_60_20
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(22250..22888)
DNA (639bp) protein (213aa)
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WPS5_9CYAN
qs_8_scaffold_60_21
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(23043..24953)
DNA (1911bp) protein (637aa)
Ribonuclease, Rne/Rng family n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XVX5_STAC7
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:AFZ35822.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
qs_8_scaffold_60_22
unknown

Not on your lists

25323..25439
DNA (117bp) protein (39aa)

This feature has no annotations

qs_8_scaffold_60_23
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(25499..26737)
DNA (1239bp) protein (413aa)
Cysteine desulfurase family protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3Y0_9CYAN
cysteine desulfurase
Cysteine desulfurase family protein {ECO:0000313|EMBL:AFY76826.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_8_scaffold_60_24
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26758..27633)
DNA (876bp) protein (292aa)
WD40 repeat-containing protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNN2_9CYAN
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AFZ21798.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcol
qs_8_scaffold_60_25
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27691..28176
DNA (486bp) protein (162aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WPR5_9CYAN
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AFZ21796.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;
qs_8_scaffold_60_26
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28286..28843
DNA (558bp) protein (186aa)
NTP pyrophosphohydrolase including oxidative damage repair enzyme n=1 Tax=Moorea producens 3L RepID=F4Y0P5_9CYAN
NTP pyrophosphohydrolase including oxidative damage repair enzyme {ECO:0000313|EMBL:EGJ29669.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source
NTP pyrophosphohydrolase
qs_8_scaffold_60_27
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

29198..30625
DNA (1428bp) protein (476aa)
Deoxyribodipyrimidine photolyase family {ECO:0000313|EMBL:EDX73611.1}; EC=4.1.99.3 {ECO:0000313|EMBL:EDX73611.1};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VX36_9CYAN
qs_8_scaffold_60_28
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(30908..31867)
DNA (960bp) protein (320aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UBX5_CYAP2
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADN15190.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC
qs_8_scaffold_60_29
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

32080..33363
DNA (1284bp) protein (428aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9SYN7_9CYAN
qs_8_scaffold_60_30
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

33542..35509
DNA (1968bp) protein (656aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; H
Multi-sensor signal transduction histidine kinase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDS5_HALP7
Displaying items 1-30 of 65 in total

View Taxonomy