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qs_8_scaffold_2470

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_2470_1
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..270
DNA (270bp) protein (90aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCJ6_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA67578.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum a
qs_8_scaffold_2470_2
unknown

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comp(236..424)
DNA (189bp) protein (63aa)

This feature has no annotations

qs_8_scaffold_2470_trna_1
unknown

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comp(583..653)
DNA (71bp)
transferRNA
qs_8_scaffold_2470_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(711..1802)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89803.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
deacylase
qs_8_scaffold_2470_4

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comp(1879..2454)
DNA (576bp) protein (192aa)
MaoC domain protein dehydratase n=1 Tax=halophilic archaeon DL31 RepID=G2MNZ1_9ARCH
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AEN07582.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_8_scaffold_2470_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2732..3664)
DNA (933bp) protein (311aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZR0_9EURY
H/ACA RNA-protein complex component Cbf5p
qs_8_scaffold_2470_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3669..3989)
DNA (321bp) protein (107aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXX5_9EURY
qs_8_scaffold_2470_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4665..5585)
DNA (921bp) protein (307aa)
HTR-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZR2_9EURY
HTR-like protein {ECO:0000313|EMBL:EFW89806.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
hypothetical protein
qs_8_scaffold_2470_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5685..6317)
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZR4_9EURY
adenylate kinase family protein
qs_8_scaffold_2470_9
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6550..6990
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WC43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45893.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
qs_8_scaffold_2470_10
unknown

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7123..7452
DNA (330bp) protein (110aa)

This feature has no annotations

qs_8_scaffold_2470_11
unknown

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comp(7640..7804)
DNA (165bp) protein (55aa)

This feature has no annotations

qs_8_scaffold_2470_12
unknown

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comp(8087..8311)
DNA (225bp) protein (75aa)

This feature has no annotations

qs_8_scaffold_2470_13
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8508..9167
DNA (660bp) protein (220aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X389_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELY56067.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source=
putative DNA binding protein
qs_8_scaffold_2470_14
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9287..9943
DNA (657bp) protein (219aa)
Bacterio-opsin activator HTH domain protein n=2 Tax=Natrinema RepID=I7CY22_NATSJ
bacterio-opsin activator
Bacterio-opsin activator {ECO:0000313|EMBL:AHF99527.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48
qs_8_scaffold_2470_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9971..10138)
DNA (168bp) protein (56aa)
TRK potassium uptake system protein TrkH n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUV8_9EURY
TRK potassium uptake system protein TrkH {ECO:0000313|EMBL:EMA36159.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
cation transporter
qs_8_scaffold_2470_16
unknown

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comp(10287..11117)
DNA (831bp) protein (277aa)

This feature has no annotations

qs_8_scaffold_2470_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11322..12131)
DNA (810bp) protein (270aa)
Transcriptional regulator n=1 Tax=Halogranum salarium B-1 RepID=J2ZF97_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EJN59365.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
transcriptional regulator
qs_8_scaffold_2470_18
unknown

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comp(12376..12687)
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 19 items

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