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qs_8_scaffold_1188

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_1188_1
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(211..615)
DNA (405bp) protein (135aa)
FmdB family transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RN49_9ACTO
FmdB family transcriptional regulator {ECO:0000313|EMBL:EEP73174.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp.
FmdB family regulatory protein
qs_8_scaffold_1188_2
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(798..1445)
DNA (648bp) protein (216aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z421_DESAT
5-formyltetrahydrofolate cyclo-ligase
qs_8_scaffold_1188_3
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1597..3078)
DNA (1482bp) protein (494aa)
Nitrate/nitrite transporter n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TTE8_9CYAN
nitrate/nitrite transporter
Nitrate/nitrite transporter {ECO:0000313|EMBL:AFY85456.1}; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria
qs_8_scaffold_1188_4
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3419..4294
DNA (876bp) protein (292aa)
gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=697286 s
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Desulfurispora thermophila RepID=UPI00035F9B43
qs_8_scaffold_1188_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4304..5530
DNA (1227bp) protein (409aa)
moeA; molybdopterin biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
molybdopterin molybdenumtransferase n=1 Tax=Sciscionella marina RepID=UPI00037469CA
molybdenum cofactor synthesis domain-containing protein
qs_8_scaffold_1188_6
unknown

Not on your lists

5596..6240
DNA (645bp) protein (215aa)

This feature has no annotations

qs_8_scaffold_1188_trna_1
unknown

Not on your lists

6293..6365
DNA (73bp)
transferRNA
qs_8_scaffold_1188_7
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6423..7937)
DNA (1515bp) protein (505aa)
Dolichyl-phosphate-mannose--protein O-mannosyl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RTD3_BLASD
Uncharacterized protein {ECO:0000313|EMBL:KGH47052.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
Dolichyl-phosphate-mannose--protein O-mannosyl transferase
qs_8_scaffold_1188_8
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8068..8925
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C026_BEUC1
uroporphyrin-III C/tetrapyrrole methyltransferase
qs_8_scaffold_1188_9
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9036..9818
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6KKD8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EST32650.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
TatD family hydrolase
qs_8_scaffold_1188_10
Arthrobacter albus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9996..10916
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255EF63
Uncharacterized protein {ECO:0000313|EMBL:KGF20283.1}; TaxID=1401063 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter albus DNF00011.;"
hypothetical protein
qs_8_scaffold_1188_11
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10930..11778
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
16S rRNA methyltransferase n=1 Tax=Brachybacterium squillarum RepID=UPI0002629910
dimethyladenosine transferase
qs_8_scaffold_1188_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11845..12954
DNA (1110bp) protein (370aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVR9_FRADG
qs_8_scaffold_1188_trna_2
unknown

Not on your lists

12942..13012
DNA (71bp)
transferRNA
qs_8_scaffold_1188_13
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13153..14556
DNA (1404bp) protein (468aa)
Bifunctional protein GlmU n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NFZ1_KITSK
glmU; putative UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source
qs_8_scaffold_1188_14
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

14561..15526
DNA (966bp) protein (322aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RBG_13_Actinobacteria_55_18_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000374E516
qs_8_scaffold_1188_15
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists


15656..16321
DNA (666bp) protein (222aa)
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 id=14428822 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L25
qs_8_scaffold_1188_16
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16334..16975
DNA (642bp) protein (214aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Frankia sp. (strain CcI3) RepID=PTH_FRASC
qs_8_scaffold_1188_17
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16990..20568
DNA (3579bp) protein (1193aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=452652 species="Bacteria; Ac
Transcription-repair-coupling factor n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NG14_KITSK
mfd; putative transcription-repair-coupling factor
qs_8_scaffold_1188_18
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20757..21857
DNA (1101bp) protein (367aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae;
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4Z9_SPISS
PpiC-type peptidyl-prolyl cis-trans isomerase
qs_8_scaffold_1188_19

Not on your lists

21835..22608
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA044-N04 RepID=UPI00036977F6
Uncharacterized protein {ECO:0000313|EMBL:KGA20190.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
qs_8_scaffold_1188_20
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22616..23707
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003677591
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:KJS58622.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinu
MazG family protein
qs_8_scaffold_1188_21
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24296..25540)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WKI7_CHLAA
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AHY46300.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubro
qs_8_scaffold_1188_22
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25658..26950
DNA (1293bp) protein (431aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI00036C8C4F
qs_8_scaffold_1188_23
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27100..27474
DNA (375bp) protein (125aa)
septum formation initiator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627A75
Septum formation initiator {ECO:0000313|EMBL:KGI82339.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.
septum formation initiator
qs_8_scaffold_1188_24
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27846..28055
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI000364E696
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW10267.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
qs_8_scaffold_1188_25
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28052..28987
DNA (936bp) protein (312aa)
Ppx/GppA phosphatase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW68_ACIC1
Ppx/GppA phosphatase
Ppx/GppA phosphatase {ECO:0000313|EMBL:ABK53678.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43
qs_8_scaffold_1188_26
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

comp(28994..29464)
DNA (471bp) protein (157aa)
Putative signal transduction protein with CBS domains n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XN77_9CHRO
hypothetical protein Tax=GWC2_SYX_53_9_curated
putative signal transduction protein with CBS domains
qs_8_scaffold_1188_27
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29527..29823
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QBH3_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU70550.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
qs_8_scaffold_1188_28
unknown

Not on your lists

29876..29974
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying items 1-30 of 62 in total

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