ggKbase home page

qs_8_scaffold_1363

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_1363_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

164..1693
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000360FC0F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
qs_8_scaffold_1363_2
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1712..3346)
DNA (1635bp) protein (545aa)
FOG: GGDEF domain n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SHY3_HAHCH
diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
diguanylate cyclase
qs_8_scaffold_1363_3
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3613..4368
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034DC9E3
Uncharacterized protein {ECO:0000313|EMBL:EST29519.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein
qs_8_scaffold_1363_4
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4760..5236
DNA (477bp) protein (159aa)
Putative sortase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CM64_CLAM3
Peptidase C60 {ECO:0000313|EMBL:KDP91838.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
putative sortase
qs_8_scaffold_1363_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5570..7951
DNA (2382bp) protein (794aa)
Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV3_NAKMY
GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with GAF sensor {ECO:0000313|EMBL:ACV76636.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella
qs_8_scaffold_1363_6
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7956..10853
DNA (2898bp) protein (966aa)
Uncharacterized protein n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TIB9_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ELB90083.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
Uncharacterized protein rbh
qs_8_scaffold_1363_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10833..11627)
DNA (795bp) protein (265aa)
Cobalt ABC transporter, ATPase subunit n=2 Tax=Micromonospora RepID=D9TDB4_MICAI
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWM65640.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospor
cobalt ABC transporter ATPase
qs_8_scaffold_1363_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11624..12391)
DNA (768bp) protein (256aa)
Cobalt ABC transporter, inner membrane subunit CbiQ n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXS1_9ACTO
Cobalt ABC transporter, inner membrane subunit CbiQ {ECO:0000313|EMBL:CCH16368.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Mic
cobalt ABC transporter inner membrane subunit CbiQ
qs_8_scaffold_1363_9
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12399..13391)
DNA (993bp) protein (331aa)
CbiM protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L878_9ACTO
cobalamin biosynthesis protein
CbiM protein {ECO:0000313|EMBL:EKX68813.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
qs_8_scaffold_1363_10
unknown

Not on your lists

13576..13761
DNA (186bp) protein (62aa)

This feature has no annotations

qs_8_scaffold_1363_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13774..15159
DNA (1386bp) protein (462aa)
Protoporphyrinogen oxidase-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AX65_STRRD
protoporphyrinogen oxidase-like protein
Protoporphyrinogen oxidase-like protein {ECO:0000313|EMBL:ACZ90792.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosp
qs_8_scaffold_1363_12
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15239..16906)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036C4755
glycosyl transferase group 2 family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ACZ90788.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium
qs_8_scaffold_1363_13
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16990..18216)
DNA (1227bp) protein (409aa)
ABC transporter n=1 Tax=Sporichthya polymorpha RepID=UPI00036AC73E
ABC transporter {ECO:0000313|EMBL:KGN35219.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
ABC transporter-like protein
qs_8_scaffold_1363_14
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18213..19934)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000381B2C6
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ELT45892.1}; Flags: Fragment;; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthro
ABC-type Fe3+ transport system, permease component
qs_8_scaffold_1363_15
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19931..20980)
DNA (1050bp) protein (350aa)
Family 1 extracellular solute-binding protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UYC9_9MICC
Iron deficiency-induced protein A {ECO:0000313|EMBL:KGN35221.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
family 1 extracellular solute-binding protein
qs_8_scaffold_1363_16
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21080..22468
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036437D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90786.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
qs_8_scaffold_1363_17
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22715..24718
DNA (2004bp) protein (668aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0V1_DESAP
qs_8_scaffold_1363_18
unknown

Not on your lists

comp(24744..24971)
DNA (228bp) protein (76aa)

This feature has no annotations

qs_8_scaffold_1363_19
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25056..27650)
DNA (2595bp) protein (865aa)
Replicative DNA helicase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F7ZZC2_CELGA
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:AEI13669.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 /
qs_8_scaffold_1363_20
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27664..28113)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UP03_9ACTO
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
50S ribosomal protein L9
qs_8_scaffold_1363_21
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(28165..28401)
DNA (237bp) protein (79aa)
30S ribosomal protein S18 n=2 Tax=Frankia RepID=RS18_FRASN
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
qs_8_scaffold_1363_22
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28493..28981)
DNA (489bp) protein (163aa)
Single-stranded DNA-binding protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P9S4_9MYCO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=525368 species="Bacteria; Actinobacteria; Cory
single-stranded DNA-binding protein
qs_8_scaffold_1363_23
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29107..29418)
DNA (312bp) protein (104aa)
30S ribosomal protein S6 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S8L9_9ACTO
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 152
rpsF; 30S ribosomal protein S6
qs_8_scaffold_1363_24
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29673..30218)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036C79AB
LOG family protein
Lysine decarboxylase {ECO:0000313|EMBL:EFO29577.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4
qs_8_scaffold_1363_25
unknown

Not on your lists

comp(30321..30722)
DNA (402bp) protein (134aa)

This feature has no annotations

qs_8_scaffold_1363_26
unknown

Not on your lists

30942..31040
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 26 items

View Taxonomy