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qs_8_scaffold_2766

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_2766_1
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3..662
DNA (660bp) protein (220aa)
Protein GrpE n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WY47_ALIAD
GrpE protein HSP-70 cofactor
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paeni
qs_8_scaffold_2766_2
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

667..1845
DNA (1179bp) protein (393aa)
Chaperone protein DnaJ n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N2K3_9ACTO
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (
Chaperone protein DnaJ 2
qs_8_scaffold_2766_3
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

1913..2320
DNA (408bp) protein (136aa)
Putative heat shock protein HspR n=1 Tax=Corynebacterium durum F0235 RepID=L1MAN9_9CORY
hspR; heat shock protein transcriptional repressor HspR
Tax=BJP_IG2102_Coriobacteriales_64_17
qs_8_scaffold_2766_4
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2470..5085
DNA (2616bp) protein (872aa)
protein disaggregation chaperone n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003690ACB
clpB; chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RBG_16_Actinobacteria_70_17_curated
ATP-dependent chaperone ClpB
qs_8_scaffold_2766_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5201..7003
DNA (1803bp) protein (601aa)
PE-PGRS family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UWJ8_9ACTO
PE-PGRS family protein {ECO:0000313|EMBL:EGD42474.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
qs_8_scaffold_2766_6
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7000..8781
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AYQ2_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH08559.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
qs_8_scaffold_2766_7
unknown

Not on your lists

9617..10399
DNA (783bp) protein (261aa)

This feature has no annotations

qs_8_scaffold_2766_8
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10347..12680)
DNA (2334bp) protein (778aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FS25_ISOV2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEG45122.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (s
qs_8_scaffold_2766_9
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12677..13570)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000375DDD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE98509.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
qs_8_scaffold_2766_10
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13612..14655
DNA (1044bp) protein (348aa)
Putative metal binding protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q829K6_STRAW
cbiX; metal binding protein
Putative metal binding protein {ECO:0000313|EMBL:BAC74116.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (str
qs_8_scaffold_2766_11
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14648..16441
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B6B0F4
Putative uncharacterized protein {ECO:0000313|EMBL:EEP71303.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
hypothetical protein
qs_8_scaffold_2766_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

16438..16800
DNA (363bp) protein (121aa)
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYB1_RUBXD
qs_8_scaffold_2766_13
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16797..17480
DNA (684bp) protein (228aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPH9_9ACTO
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
qs_8_scaffold_2766_14
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17499..17804
DNA (306bp) protein (102aa)
Translation initiation factor IF-1 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SUR3_9DELT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;
translation initiation factor IF-1
qs_8_scaffold_2766_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

18068..18817
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT372 RepID=UPI0003680251
cation diffusion facilitator family transporter Tax=RBG_16_RIF_CHLX_69_14_curated
putative CDF family transporter
qs_8_scaffold_2766_16
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18899..21052)
DNA (2154bp) protein (718aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQB6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85618.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;
qs_8_scaffold_2766_17
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21402..21797
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Salinicoccus carnicancri RepID=UPI00031094A1
RNA binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:ADL41927.1}; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicel
qs_8_scaffold_2766_18
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21966..22769
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00037BE8BF
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ELP70709.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidis
qs_8_scaffold_2766_19
unknown

Not on your lists

comp(22989..23192)
DNA (204bp) protein (68aa)

This feature has no annotations

qs_8_scaffold_2766_20
Dermacoccus nishinomiyaensis, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23959..25278
DNA (1320bp) protein (440aa)
Iron-regulated ABC transporter permease protein SufD n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZN2_RUBXD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIF40846.1}; TaxID=1274 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus nishinomiyaensis.;"
qs_8_scaffold_2766_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25278..25622
DNA (345bp) protein (115aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUQ7_PSEUX
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEA26371.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
qs_8_scaffold_2766_22
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25680..26327
DNA (648bp) protein (216aa)
FeS assembly ATPase SufC n=3 Tax=Propionibacterium RepID=U1FFP1_9ACTO
FeS assembly ATPase SufC {ECO:0000313|EMBL:ERF58488.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granu
ABC transporter ATP-binding protein
qs_8_scaffold_2766_23
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

26464..27696
DNA (1233bp) protein (411aa)
SufS subfamily cysteine desulfurase (EC:4.4.1.16)
Cysteine desulfurase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL37_THEM7
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
qs_8_scaffold_2766_24
actinobacterium SCGC AAA027-L06, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27748..28209
DNA (462bp) protein (154aa)
nitrogen fixation protein NifU n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003722C5F
NifU family SUF system FeS assembly protein
Iron-sulfur cluster biosynthesis protein, NifU-like protein {ECO:0000313|EMBL:EJX35888.1}; TaxID=913338 species="Bacteria; Actinobacteria.;" source="actinobacterium SCGC AAA027-L06.;"
qs_8_scaffold_2766_25
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28263..28679
DNA (417bp) protein (139aa)
FeS assembly SUF system domain n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B40DB3
FeS assembly SUF system domain {ECO:0000313|EMBL:KFI81254.1}; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychrae
hypothetical protein
qs_8_scaffold_2766_26
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

28833..30002
DNA (1170bp) protein (390aa)
UBA/THIF-type NAD/FAD binding fold n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY17_RUBXD
ThiF family
ThiF family {ECO:0000313|EMBL:AHY47427.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radioto
qs_8_scaffold_2766_27
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29996..31756)
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037A8733
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62621.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
vancomycin resistance protein-like protein
qs_8_scaffold_2766_28
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32157..33371
DNA (1215bp) protein (405aa)
M23B-like peptidase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LS25_THEPS
Uncharacterized protein {ECO:0000313|EMBL:KGF09074.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacter
M23B-like peptidase
qs_8_scaffold_2766_29
unknown

Not on your lists

comp(33372..33980)
DNA (609bp) protein (203aa)

This feature has no annotations

Displaying 29 items

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