ggKbase home page

qs_8_scaffold_631

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_631_1
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3..2282
DNA (2280bp) protein (760aa)
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RBG_16_Actinobacteria_70_17_curated
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=2 Tax=Thermobifida fusca RepID=Q47LQ9_THEFY
qs_8_scaffold_631_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2422..2742
DNA (321bp) protein (107aa)
ferredoxin n=1 Tax=Dietzia sp. UCD-THP RepID=UPI000369833F
fdxA; ferredoxin Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Ferredoxin
qs_8_scaffold_631_3
unknown

Not on your lists

comp(2825..3307)
DNA (483bp) protein (161aa)

This feature has no annotations

qs_8_scaffold_631_4
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3510..3905
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000378DFE5
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KJK13695.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
cobalamin B12-binding domain-containing protein
qs_8_scaffold_631_5
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3940..5091
DNA (1152bp) protein (384aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
succinyl-CoA ligase (ADP-forming) subunit beta (EC:6.2.1.5)
succinyl-CoA synthetase subunit beta n=1 Tax=Nocardiopsis synnemataformans RepID=UPI0003456397
qs_8_scaffold_631_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5088..6005
DNA (918bp) protein (306aa)
succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_16_Actinobacteria_68_12_curated
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWI9_RUBXD
qs_8_scaffold_631_7
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6085..6771)
DNA (687bp) protein (229aa)
DNA-binding protein n=1 Tax=Nocardiopsis alkaliphila RepID=UPI00034C5580
DNA-binding protein {ECO:0000313|EMBL:KIH98517.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
HylII
qs_8_scaffold_631_8
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6963..7598
DNA (636bp) protein (212aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MU43_SACVD
phosphoribosylglycinamide formyltransferase
qs_8_scaffold_631_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7618..9165
DNA (1548bp) protein (516aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P364_LEIXC
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifs
qs_8_scaffold_631_10
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9307..9858
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5K1_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07689.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain
qs_8_scaffold_631_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9929..10792
DNA (864bp) protein (288aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolat
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=Sciscionella marina RepID=UPI0003810DFF
Bifunctional protein folD
qs_8_scaffold_631_12
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10794..11723
DNA (930bp) protein (310aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Actinobacteria_67_15_curated
Malate dehydrogenase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVQ4_FRADG
malate dehydrogenase
qs_8_scaffold_631_13
unknown

Not on your lists

11796..12080
DNA (285bp) protein (95aa)

This feature has no annotations

qs_8_scaffold_631_14
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12253..14211
DNA (1959bp) protein (653aa)
acsA; acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
Acetyl-coenzyme A synthetase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5ARM0_9ACTN
qs_8_scaffold_631_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14388..15362
DNA (975bp) protein (325aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRV4_ACIC1
qs_8_scaffold_631_16
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15367..17343
DNA (1977bp) protein (659aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Brevibacillus laterosporus PE36 RepID=U4WSB9_BRELA
yjjK_2; putative ABC transporter ATP-binding protein YjjK
ABC transporter {ECO:0000313|EMBL:AKF94537.1}; TaxID=1465 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus (Bacillus laterospor
qs_8_scaffold_631_17
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17340..17912
DNA (573bp) protein (191aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia
Oligoribonuclease n=1 Tax=Frankia sp. CN3 RepID=G6HHF4_9ACTO
exonuclease RNase T and DNA polymerase III
qs_8_scaffold_631_18
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18523..20085
DNA (1563bp) protein (521aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S6U5_INTC7
N-acetylmuramoyl-L-alanine amidase family 2 protein
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:ADU46831.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" sour
qs_8_scaffold_631_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20096..20776)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9V5_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73818.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
qs_8_scaffold_631_20
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20845..23244)
DNA (2400bp) protein (800aa)
trehalose phosphorylase (EC:2.4.1.64)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI000370E345
Kojibiose phosphorylase {ECO:0000313|EMBL:KIH77684.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibac
qs_8_scaffold_631_21
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23190..24041)
DNA (852bp) protein (284aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:ABD02326.1}; EC=2.7.1.15 {ECO:0000313|EMBL:ABD02326.1};; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Syne
Ribokinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C448_BEUC1
qs_8_scaffold_631_trna_1
unknown

Not on your lists

comp(24325..24396)
DNA (72bp)
transferRNA
qs_8_scaffold_631_22
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24668..25675
DNA (1008bp) protein (336aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein id=14429997 bin=bin3_NC10 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
moaA; molybdenum cofactor biosynthesis protein A
qs_8_scaffold_631_23
unknown

Not on your lists

25867..26331
DNA (465bp) protein (155aa)

This feature has no annotations

qs_8_scaffold_631_24
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26295..27281)
DNA (987bp) protein (329aa)
UDP pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase 1 {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein 1 {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophos
UDP pyrophosphate phosphatase n=1 Tax=Actinoplanes globisporus RepID=UPI0003616B75
qs_8_scaffold_631_25
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27278..27985)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI00036CCE60
Molybdopterin converting factor, large subunit {ECO:0000313|EMBL:EKP95056.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaer
moaDE; molybdopterin converting factor, subunits 1/2
qs_8_scaffold_631_26
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27982..28515)
DNA (534bp) protein (178aa)
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:EKP94554.1}; EC=2.7.7.75 {ECO:0000313|EMBL:EKP94554.1};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family
Molybdopterin adenylyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0W9_9FIRM
molybdenum cofactor synthesis domain-containing protein
qs_8_scaffold_631_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28774..29733
DNA (960bp) protein (320aa)
Nicotinic acid mononucleotide biosynthesis protein n=2 Tax=mine drainage metagenome RepID=T1AI18_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAN45720.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
qs_8_scaffold_631_28
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29842..30825
DNA (984bp) protein (328aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
Quinolinate synthase A n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASX8_AZOBR
quinolinate synthetase
qs_8_scaffold_631_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(30836..31321)
DNA (486bp) protein (162aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z1_CONWI
molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=469383 species="Bact
Displaying items 1-30 of 31 in total

View Taxonomy