ggKbase home page

qs_8_scaffold_1413

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_1413_1
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..120
DNA (120bp) protein (40aa)
Gluconate transporter {ECO:0000313|EMBL:KFF50067.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
qs_8_scaffold_1413_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(370..3030)
DNA (2661bp) protein (887aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBH24218.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=761659
DNA topoisomerase I n=1 Tax=Salisaeta longa RepID=UPI0003B35DA8
topA; DNA topoisomerase I
qs_8_scaffold_1413_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3322..4023)
DNA (702bp) protein (234aa)
dpsA; starvation induced DNA binding protein id=24659058 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
dpsA; starvation induced DNA binding protein
Starvation induced DNA binding protein {ECO:0000313|EMBL:CBH24217.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_8_scaffold_1413_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

4309..4929
DNA (621bp) protein (207aa)
superoxide dismutase copper/zinc binding protein; K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000368BA9F
Cu/Zn superoxide dismutase
qs_8_scaffold_1413_5
unknown

Not on your lists

comp(5245..5499)
DNA (255bp) protein (85aa)

This feature has no annotations

qs_8_scaffold_1413_trna_1
unknown

Not on your lists

comp(5747..5819)
DNA (73bp)
transferRNA
qs_8_scaffold_1413_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6297..6725)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B58813
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25101.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1413_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6754..7641)
DNA (888bp) protein (296aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Salinibacter ruber RepID=ISPE_SALRD
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
qs_8_scaffold_1413_8
unknown

Not on your lists

comp(7732..8211)
DNA (480bp) protein (160aa)

This feature has no annotations

qs_8_scaffold_1413_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8524..9009)
DNA (486bp) protein (162aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEJ9_RHOM4
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
qs_8_scaffold_1413_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9144..9674)
DNA (531bp) protein (177aa)
Proton/peptide symporter family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAP4_SALRM
proton/peptide symporter family protein
Proton/peptide symporter family protein {ECO:0000313|EMBL:ABC45970.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_8_scaffold_1413_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9658..10965)
DNA (1308bp) protein (436aa)
major facilitator transporter n=1 Tax=Salisaeta longa RepID=UPI0003B5946D
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:AEN74241.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
qs_8_scaffold_1413_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


11359..13257
DNA (1899bp) protein (633aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=24657891 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
aspS; aspartyl-tRNA synthetase
Displaying 13 items

View Taxonomy