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qs_8_scaffold_174

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_174_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(113..2605)
DNA (2493bp) protein (831aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B74598
TonB-dependent receptor domain-containing protein
TonB-dependent receptor domain protein {ECO:0000313|EMBL:ABC43598.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_8_scaffold_174_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2827..3390)
DNA (564bp) protein (188aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5C3_HALJB
methionine sulfoxide reductase A
qs_8_scaffold_174_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3556..4707)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B370EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45007.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_174_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4755..5378)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4G4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44322.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_174_5
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

5510..5728
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036B43BC
hypothetical protein; K09165 hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
qs_8_scaffold_174_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5752..6333)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCS1_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47031.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_8_scaffold_174_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6625..8301)
DNA (1677bp) protein (559aa)
Carboxy-terminal peptidase {ECO:0000313|EMBL:CBH23878.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH23878.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Carboxy-terminal peptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H773_SALRM
prc; carboxy-terminal peptidase
qs_8_scaffold_174_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8405..9151)
DNA (747bp) protein (249aa)
Sec-independent protein translocase protein TatC n=2 Tax=Salinibacter ruber RepID=D5H772_SALRM
tatC; Sec-independent protein translocase protein TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_8_scaffold_174_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9360..9977)
DNA (618bp) protein (206aa)
Phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE81_RHOMR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACY47034.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_8_scaffold_174_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10213..11511)
DNA (1299bp) protein (433aa)
Serine hydroxymethyltransferase n=3 Tax=Salinibacter ruber RepID=GLYA_SALRD
glyA; Serine hydroxymethyltransferase
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBH23875.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
qs_8_scaffold_174_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11558..11944)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MCS6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47036.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_174_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12042..12746)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4H1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23873.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_174_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12985..13485)
DNA (501bp) protein (167aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] id=24658152 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBH25355.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
fklB; peptidyl-prolyl cis-trans isomerase
qs_8_scaffold_174_14
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13851..14867)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DYC3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK17157.1}; TaxID=1208320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans R6-1
qs_8_scaffold_174_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15234..15815
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZI7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45787.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_174_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15936..16457
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ9_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49143.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_8_scaffold_174_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16685..17053
DNA (369bp) protein (123aa)
iojap family protein n=1 Tax=Salisaeta longa RepID=UPI0003B7B68A
iojap-like protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
qs_8_scaffold_174_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17096..17629
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ7_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49141.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_174_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17691..18062
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49140.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_8_scaffold_174_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18100..18447)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ5_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49139.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_174_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18490..19293)
DNA (804bp) protein (268aa)
lipB; Lipoyltransferase; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=24658499 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipB; Lipoyltransferase
qs_8_scaffold_174_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19369..27213)
DNA (7845bp) protein (2615aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCD8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25693.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_174_23
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

27649..28224
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003806D70
Uncharacterized protein {ECO:0000313|EMBL:KER09412.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
hypothetical protein
qs_8_scaffold_174_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28363..29070
DNA (708bp) protein (236aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEN74514.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEN74514.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJX3_RHOMR
qs_8_scaffold_174_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29052..30296)
DNA (1245bp) protein (415aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:CBH25694.1}; EC=1.5.1.10 {ECO:0000313|EMBL:CBH25694.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
LYS9; saccharopine dehydrogenase
LYS9; saccharopine dehydrogenase id=24658501 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_8_scaffold_174_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30379..31194)
DNA (816bp) protein (272aa)
recR; recombination protein RecR
recR; Recombination protein recR; K06187 recombination protein RecR id=24658502 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_8_scaffold_174_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31275..31649)
DNA (375bp) protein (125aa)
Nucleoid-associated protein SRU_2556 n=2 Tax=Salinibacter ruber RepID=Q2RZH7_SALRD
hypothetical protein
Nucleoid-associated protein SRU_2556 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_8_scaffold_174_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31819..34122)
DNA (2304bp) protein (768aa)
DNA polymerase III, subunits gamma and tau, putative {ECO:0000313|EMBL:ABC43732.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABC43732.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. In
DNA polymerase III subunit tau n=2 Tax=Salinibacter ruber RepID=D5HCE2_SALRM
DNA polymerase III subunits gamma and tau
qs_8_scaffold_174_29
unknown

Not on your lists

comp(34420..34512)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 29 items

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