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qs_8_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_23_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..369)
DNA (369bp) protein (123aa)
sodium/alanine symporter
sodium/alanine symporter; K03310 alanine or glycine:cation symporter, AGCS family id=24659233 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sodium/alanine symporter {ECO:0000313|EMBL:ABC45954.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_8_scaffold_23_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(496..1500)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B66915
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24126.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_23_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1638..2321)
DNA (684bp) protein (228aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIZ0_RHOMR
ABC transporter related protein {ECO:0000313|EMBL:ACY48536.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_8_scaffold_23_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2392..3228)
DNA (837bp) protein (279aa)
Methyltransferase type 11 n=2 Tax=Rhodothermus marinus RepID=D0MJ79_RHOM4
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACY48537.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_8_scaffold_23_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3238..4329)
DNA (1092bp) protein (364aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIY8_RHOMR
qs_8_scaffold_23_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4433..5506)
DNA (1074bp) protein (358aa)
Dhh family/dhha1 domain protein n=2 Tax=Salinibacter ruber RepID=D5H7W8_SALRM
DHH domain-containing protein
Dhh family/dhha1 domain protein {ECO:0000313|EMBL:CBH24123.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qs_8_scaffold_23_7
unknown

Not on your lists

comp(5660..6322)
DNA (663bp) protein (221aa)

This feature has no annotations

qs_8_scaffold_23_8
unknown

Not on your lists

6574..6783
DNA (210bp) protein (70aa)

This feature has no annotations

qs_8_scaffold_23_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6691..8124)
DNA (1434bp) protein (478aa)
ndh; NADH dehydrogenase; K03885 NADH dehydrogenase [EC:1.6.99.3] id=24658155 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH dehydrogenase {ECO:0000313|EMBL:CBH25359.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CBH25359.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
ndh; NADH dehydrogenase
qs_8_scaffold_23_10
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8382..9500
DNA (1119bp) protein (373aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2IW32_9PSED
qs_8_scaffold_23_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9729..11066
DNA (1338bp) protein (446aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacterida
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHW9_9CHLR
alanine racemase
qs_8_scaffold_23_12
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11138..11815
DNA (678bp) protein (226aa)
metallophosphoesterase n=1 Tax=Salisaeta longa RepID=UPI0003B76A5C
metallophosphoesterase Tax=GWA2_Deltaproteobacteria_54_12_curated
metallophosphoesterase
qs_8_scaffold_23_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11924..13078)
DNA (1155bp) protein (385aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=309807 species="Bacteria; Bacteroidetes; Bactero
pyrC; dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] id=24658141 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pyrC; dihydroorotase
qs_8_scaffold_23_14
Spiribacter sp. UAH-SP71, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13591..14019)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T676_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY92806.1}; TaxID=1335757 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter sp
qs_8_scaffold_23_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14281..16728)
DNA (2448bp) protein (816aa)
peptidase S9 n=1 Tax=Salisaeta longa RepID=UPI0003B5D684
dipeptidyl peptidase IV
Dipeptidyl peptidase IV (DPP IV) {ECO:0000313|EMBL:CBH23585.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_8_scaffold_23_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16860..18068
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHD1_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47889.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_8_scaffold_23_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18169..19437
DNA (1269bp) protein (423aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=309807 species="Bacteria; Bactero
Alanine racemase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S515_SALRD
alr; alanine racemase
qs_8_scaffold_23_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19623..20345
DNA (723bp) protein (241aa)
hisitidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B4C9E1
drrA; response regulator DrrA
Response regulator DrrA {ECO:0000313|EMBL:ABC46239.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_23_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20489..21949
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensor kinase
Sensor kinase id=24657425 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_8_scaffold_23_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22109..23881
DNA (1773bp) protein (591aa)
Serine protease / subtilase peptidase {ECO:0000313|EMBL:CBH23572.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH23572.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Serine protease / subtilase peptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B7_SALRM
Serine protease / subtilase peptidase
qs_8_scaffold_23_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24453..26675
DNA (2223bp) protein (741aa)
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit {ECO:0000313|EMBL:CBH23588.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CBH23588.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6D3_SALRM
acoA_pdhA; 2-oxoisovalerate dehydrogenase, E1 component subunits alpha and beta
qs_8_scaffold_23_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26822..27616)
DNA (795bp) protein (265aa)
tonB; TonB protein; K03832 periplasmic protein TonB id=24657360 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tonB; TonB protein
TonB family protein {ECO:0000313|EMBL:AEN72400.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qs_8_scaffold_23_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28028..28492
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S017_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45648.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_23_24
unknown

Not on your lists

comp(28538..29182)
DNA (645bp) protein (215aa)

This feature has no annotations

qs_8_scaffold_23_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29275..30501)
DNA (1227bp) protein (409aa)
cystathionine beta-lyase n=1 Tax=Salisaeta longa RepID=UPI0003B75F37
Cys/Met metabolism PLP-dependent enzyme superfamily protein
Cys/Met metabolism PLP-dependent enzyme superfamily {ECO:0000313|EMBL:ABC45418.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qs_8_scaffold_23_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30695..31942)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B61C3B
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEN73790.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
qs_8_scaffold_23_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32226..33296
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B72F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25503.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_23_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33445..34722
DNA (1278bp) protein (426aa)
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:CBH25501.1}; EC=3.7.1.2 {ECO:0000313|EMBL:CBH25501.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
fumarylacetoacetase n=1 Tax=Salisaeta longa RepID=UPI0003B4FC69
fahA; Fumarylacetoacetate (FAA) hydrolase
qs_8_scaffold_23_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35051..35509
DNA (459bp) protein (153aa)
heat shock protein Hsp20 n=1 Tax=Salisaeta longa RepID=UPI0003B415E9
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEN73791.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_8_scaffold_23_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35806..36486
DNA (681bp) protein (227aa)
NUDIX hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B39127
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEN73795.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.
Displaying items 1-30 of 55 in total

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