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qs_8_scaffold_297

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_297_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

qs_8_scaffold_297_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(250..669)
DNA (420bp) protein (140aa)
protein-export membrane protein
protein-export membrane protein; K03075 preprotein translocase subunit SecG id=24658052 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44705.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_297_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(763..1374)
DNA (612bp) protein (204aa)
NUDIX hydrolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEV0_RHOMR
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEN72868.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.
qs_8_scaffold_297_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1438..2166)
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. I
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEV2_RHOMR
ribosomal RNA small subunit methyltransferase E
qs_8_scaffold_297_trna_1
unknown

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2412..2483
DNA (72bp)
transferRNA
qs_8_scaffold_297_5
unknown

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comp(2423..2743)
DNA (321bp) protein (107aa)

This feature has no annotations

qs_8_scaffold_297_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2962..3330
DNA (369bp) protein (123aa)
Uncharacterized conserved membrane protein n=2 Tax=Salinibacter ruber RepID=Q2S2N1_SALRD
hypothetical protein
Uncharacterized conserved membrane protein {ECO:0000313|EMBL:ABC44849.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_8_scaffold_297_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3522..4187
DNA (666bp) protein (222aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA9_RHOMR
qs_8_scaffold_297_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4336..4911)
DNA (576bp) protein (192aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroi
Shikimate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFA7_RHOM4
qs_8_scaffold_297_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4963..5760
DNA (798bp) protein (266aa)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=TRUA_SALRD
truA; tRNA pseudouridine synthase A
qs_8_scaffold_297_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6068..6820
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC01_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25556.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_297_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6880..7929
DNA (1050bp) protein (350aa)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACY48222.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACY48222.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIB4_RHOM4
LacI family transcriptional regulator
qs_8_scaffold_297_12
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(7973..9064)
DNA (1092bp) protein (364aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I {ECO:0000313|EMBL:AGY59939.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AGY59939.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gl
DNA topoisomerase I n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQP3_9CYAN
qs_8_scaffold_297_13
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9140..9958)
DNA (819bp) protein (273aa)
Oxidoreductase aldo/keto reductase family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JY12_9BACT
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:ELR73063.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga im
aldo/keto reductase
qs_8_scaffold_297_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10071..11186)
DNA (1116bp) protein (372aa)
hypothetical protein
hypothetical protein id=24658715 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45350.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_297_15
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11507..12571
DNA (1065bp) protein (355aa)
Capsule biosynthesis protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PM67_9DELT
Capsule biosynthesis protein {ECO:0000313|EMBL:EPX64091.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sourc
capsule biosynthesis protein, capa family
qs_8_scaffold_297_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12657..13847
DNA (1191bp) protein (397aa)
hydroxyglutarate oxidase n=1 Tax=Salisaeta longa RepID=UPI0003B75A2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25901.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_297_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14124..17030
DNA (2907bp) protein (969aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
Phosphoenolpyruvate carboxylase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6D5_SALRD
ppc; phosphoenolpyruvate carboxylase
qs_8_scaffold_297_18

Not on your lists

comp(17117..18235)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N014_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN00290.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
qs_8_scaffold_297_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18382..19161
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDA3_RHOM4
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY49015.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
qs_8_scaffold_297_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19304..22495
DNA (3192bp) protein (1064aa)
hypothetical protein
hypothetical protein id=24657268 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45479.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_297_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22781..25117)
DNA (2337bp) protein (779aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB7_RHOMR
qs_8_scaffold_297_22
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

25362..25778
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00030971BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY56467.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
Displaying 23 items

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