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qs_8_scaffold_994

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_994_trna_1
unknown

Not on your lists

comp(52..137)
DNA (86bp)
transferRNA
qs_8_scaffold_994_1
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

1048..2154
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00036F5A09
Oxidoreductase, aldo/keto reductase family protein
aldo/keto reductase Tax=RBG_13_Chloroflexi_50_21_curated
qs_8_scaffold_994_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2462..3535
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B72844
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_8_scaffold_994_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3747..4166
DNA (420bp) protein (140aa)
30S ribosomal protein S6 n=2 Tax=Salinibacter ruber RepID=Q2S2U2_SALRD
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000313|EMBL:CBH24481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_8_scaffold_994_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4210..4425
DNA (216bp) protein (72aa)
rpsR; 30S ribosomal protein S18
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=24659315 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270, ECO:0000313|EMBL:CBH24482.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_8_scaffold_994_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4517..4966
DNA (450bp) protein (150aa)
rplI; 50S ribosomal protein L9
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=24659316 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503, ECO:0000313|EMBL:CBH24483.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_8_scaffold_994_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5120..5407
DNA (288bp) protein (96aa)
hypothetical protein
hypothetical protein id=24658080 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25283.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_994_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5676..6377)
DNA (702bp) protein (234aa)
Asparaginase/glutaminase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI70_RHOMR
asparaginase/glutaminase
Asparaginase/glutaminase {ECO:0000313|EMBL:AEN74126.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_8_scaffold_994_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6416..7234)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCV0_RHOM4
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_8_scaffold_994_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7643..8782
DNA (1140bp) protein (380aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT5_RHOMR
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
qs_8_scaffold_994_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8926..10104
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B55CA1
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ACY47600.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qs_8_scaffold_994_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10346..12583
DNA (2238bp) protein (746aa)
Surface antigen (D15) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT3_RHOMR
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEN74080.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="
qs_8_scaffold_994_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13284..18131
DNA (4848bp) protein (1616aa)
hypothetical protein
hypothetical protein; K09800 hypothetical protein id=24659206 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45887.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_994_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18228..19031
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT1_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47603.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_994_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19120..20046
DNA (927bp) protein (309aa)
ABC transporter related protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG48_RHOM4
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY47604.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_8_scaffold_994_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20153..21328
DNA (1176bp) protein (392aa)
Mammalian cell entry related domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG49_RHOM4
mammalian cell entry domain-containing protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:AEN74076.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rh
qs_8_scaffold_994_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21720..22409
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8U8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24453.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_994_17
unknown

Not on your lists

22727..23044
DNA (318bp) protein (106aa)

This feature has no annotations

qs_8_scaffold_994_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23096..23314)
DNA (219bp) protein (73aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAK1_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH25056.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_8_scaffold_994_19
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(23381..24319)
DNA (939bp) protein (313aa)
Gluconolactonase (EC:3.1.1.17)
Gluconolactonase {ECO:0000313|EMBL:AFZ35056.1}; EC=3.1.1.17 {ECO:0000313|EMBL:AFZ35056.1};; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000371DB9B
qs_8_scaffold_994_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24682..26223)
DNA (1542bp) protein (514aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000313|EMBL:CBH25561.1}; EC=1.1.1.34 {ECO:0000313|EMBL:CBH25561.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
hydroxymethylglutaryl-CoA reductase n=1 Tax=Salisaeta longa RepID=UPI0003B6943F
hmgA; 3-hydroxy-3-methylglutaryl coenzyme A reductase
qs_8_scaffold_994_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26319..27545)
DNA (1227bp) protein (409aa)
Arsenite-activated ATPase (ArsA) subfamily {ECO:0000313|EMBL:ABC46144.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC46144.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Arsenite-activated ATPase (ArsA) subfamily n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZW1_SALRD
arsenite-activated ATPase ArsA
qs_8_scaffold_994_22
unknown

Not on your lists

27703..27975
DNA (273bp) protein (91aa)

This feature has no annotations

qs_8_scaffold_994_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27894..28541)
DNA (648bp) protein (216aa)
Transcriptional repressor, LexA family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGL8_RHOM4
LexA family transcriptional repressor
Transcriptional repressor, LexA family {ECO:0000313|EMBL:ACY49581.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_8_scaffold_994_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28926..29372
DNA (447bp) protein (149aa)
Protein MraZ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A4_SALRM
mraZ; protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
qs_8_scaffold_994_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29444..30601
DNA (1158bp) protein (386aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A5_SALRM
mraW; S-adenosyl-methyltransferase mraW
qs_8_scaffold_994_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30668..31054
DNA (387bp) protein (129aa)
hypothetical protein
hypothetical protein id=24657404 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43676.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_994_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31071..33116
DNA (2046bp) protein (682aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEN74607.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEN74607.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Peptidoglycan glycosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL90_RHOMR
qs_8_scaffold_994_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33264..34862
DNA (1599bp) protein (533aa)
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=24657406 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
qs_8_scaffold_994_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34944..36026
DNA (1083bp) protein (361aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Salisaeta longa RepID=UPI0003B70C7D
phospho-N-acetylmuramoyl-pentapeptide-transferase
Displaying items 1-30 of 39 in total

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