ggKbase home page

qs_8_scaffold_524_4

Organism: QS_8_Bacteroidetes_Order_II__Incertae_sedis_68_28

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(3624..4352)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Cas5d family n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DY05_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 234.0
  • Bit_score: 204
  • Evalue 1.40e-49
CRISPR-associated protein, Cas5d family {ECO:0000313|EMBL:CCU78371.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 234.0
  • Bit_score: 204
  • Evalue 2.00e-49
CRISPR-associated Csd1 family protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 233.0
  • Bit_score: 196
  • Evalue 8.30e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halanaerobium saccharolyticum → Halanaerobium → Halanaerobiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 729
ATGAGTTTTCGTGTCGTCGCTGGTGGAGACTTTGCCTGCTTCACCCGGCCCGAGATGAAAGTCGAGCGTGTCAGCTACGAGATGATGACGCCCTCGGCGGCGCGCGGGCTGCTGGAGGCGATTTTCTGGAAGCCGGCCATTGCCTACCGCATCCAGTCGATCACGCCGCTCGAGCCGGTGCGCTTCGTGCAGCTGCGCCGCAGCGAGGTGAAGAGCAAGGCCGGCGTGCCCGGCAAGACGAATTGGAAAAATGGCACGCCCGTCTCGCGCATCGACGTGGACGCAATGGAGAAGGGCCGCCCGAACGTGCCGGCCGAGCGTACGCTGCGCTCCACGCTCGCGCTCAAAGACGTGGCCTACCTCATCAAGGCGGACTTCGACCTCGTGCGCTACGGGCTGGGCGAGGCCGAAGAGCACGGCGAGCATGCGGCCAAAGCGAAGTACCGCGACCAGATTCGCCGCCGCATCAATCGCGGCCAGTGCTACCGGCGCCCGTACCTGGGCTGCCGCGAGTTCGCCGCGTGGTTTCGCCCGCCGGAAGAGGGCGACACACCCGCCCTCGGCACGCAGCCGCTCGGGCGAATGCTCTTCGACATCCGCTTCGACCCGGTGGATGCCTCCGTCAAGGATTACGATGCCACGCCGCACTTCTTTTCTGCCTCGCTCGACGGCGGCGTGCTCCACGTCCCGCAGGAGCCGTACGAAGACACCATCGCCGCCAAGCACTGA
PROTEIN sequence
Length: 243
MSFRVVAGGDFACFTRPEMKVERVSYEMMTPSAARGLLEAIFWKPAIAYRIQSITPLEPVRFVQLRRSEVKSKAGVPGKTNWKNGTPVSRIDVDAMEKGRPNVPAERTLRSTLALKDVAYLIKADFDLVRYGLGEAEEHGEHAAKAKYRDQIRRRINRGQCYRRPYLGCREFAAWFRPPEEGDTPALGTQPLGRMLFDIRFDPVDASVKDYDATPHFFSASLDGGVLHVPQEPYEDTIAAKH*