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qs_8_scaffold_524

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_524_1

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1..837
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PG34_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH75422.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
qs_8_scaffold_524_2
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(1025..1906)
DNA (882bp) protein (294aa)
CRISPR-associated protein, Csd2 family n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DZ03_9FIRM
CRISPR-associated protein, Csd2 family {ECO:0000313|EMBL:CCU78374.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium
CRISPR-associated Csh2 family protein
qs_8_scaffold_524_3
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1969..3600)
DNA (1632bp) protein (544aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RL63_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68269.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
CRISPR-associated Csd1 family protein
qs_8_scaffold_524_4
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3624..4352)
DNA (729bp) protein (243aa)
CRISPR-associated protein, Cas5d family n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DY05_9FIRM
CRISPR-associated protein, Cas5d family {ECO:0000313|EMBL:CCU78371.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobiu
CRISPR-associated Csd1 family protein
qs_8_scaffold_524_5
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4422..6587)
DNA (2166bp) protein (722aa)
CRISPR-associated helicase, Cas3 family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RL61_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67172.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
CRISPR-associated helicase Cas3
qs_8_scaffold_524_6
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(6630..8069)
DNA (1440bp) protein (480aa)
MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWB4_TRURR
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ADI16064.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera
qs_8_scaffold_524_7
unknown

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8119..8454
DNA (336bp) protein (112aa)

This feature has no annotations

qs_8_scaffold_524_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8900..10021
DNA (1122bp) protein (374aa)
glucose/sorbosone dehydrogenase
glucose/sorbosone dehydrogenase id=24657300 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative Glucose/sorbosone dehydrogenases {ECO:0000313|EMBL:CBH23447.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
qs_8_scaffold_524_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10088..11797)
DNA (1710bp) protein (570aa)
peptide chain release factor 3 n=1 Tax=Salisaeta longa RepID=UPI0003B767BC
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
qs_8_scaffold_524_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12414..13373
DNA (960bp) protein (320aa)
Cysteine synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJA5_RHOM4
cysteine synthase
Cysteine synthase {ECO:0000313|EMBL:ACY48563.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (s
qs_8_scaffold_524_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13560..14021
DNA (462bp) protein (154aa)
hypothetical protein
Mov34/MPN/PAD-1 family protein id=24657971 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Mov34/MPN/PAD-1 family {ECO:0000313|EMBL:ABC44045.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_8_scaffold_524_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14131..14466
DNA (336bp) protein (112aa)
ThiamineS n=2 Tax=Salinibacter ruber RepID=D5HAX2_SALRM
thiS; ThiamineS
ThiamineS {ECO:0000313|EMBL:CBH25177.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).
qs_8_scaffold_524_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14552..15763
DNA (1212bp) protein (404aa)
MoeZ/MoeB domain-contain protein
moeB; Molybdopterin biosynthesis protein moeB; K11996 adenylyltransferase and sulfurtransferase id=24657974 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Molybdopterin biosynthesis protein moeB {ECO:0000313|EMBL:CBH25178.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_8_scaffold_524_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15891..16370)
DNA (480bp) protein (160aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFG3_RHOM4
anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACY47490.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
qs_8_scaffold_524_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16652..17014)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEM0_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72498.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_524_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(17091..19760)
DNA (2670bp) protein (890aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=2 Tax=Salinibacter ruber RepID=D5HAX5_SALRM
valS; valyl-tRNA synthetase
qs_8_scaffold_524_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19880..21529)
DNA (1650bp) protein (550aa)
Phytoene dehydrogenase {ECO:0000313|EMBL:CBH25197.1}; EC=1.14.99.- {ECO:0000313|EMBL:CBH25197.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
Phytoene dehydrogenase n=2 Tax=Salinibacter ruber RepID=D5HAZ2_SALRM
crtI; phytoene dehydrogenase
qs_8_scaffold_524_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21721..23730)
DNA (2010bp) protein (670aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACY49286.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACY49286.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B59069
PAS/PAC sensor hybrid histidine kinase
qs_8_scaffold_524_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23969..25330)
DNA (1362bp) protein (454aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD25_RHOM4
3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
qs_8_scaffold_524_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25490..25804)
DNA (315bp) protein (105aa)
yajC; Preprotein translocase subunit YajC
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=24656822 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ABC44567.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_8_scaffold_524_21
unknown

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comp(26060..26530)
DNA (471bp) protein (157aa)

This feature has no annotations

qs_8_scaffold_524_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(26763..27455)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GEH5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52300.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
qs_8_scaffold_524_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28100..28600
DNA (501bp) protein (167aa)
IS5 family transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4E1_SALRM
IS5 family transposase
IS5 family transposase {ECO:0000313|EMBL:CBH22781.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_8_scaffold_524_24
unknown

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29441..29581
DNA (141bp) protein (47aa)

This feature has no annotations

qs_8_scaffold_524_25
unknown

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29683..29766
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 25 items

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