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qs_8_scaffold_3402

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_3402_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3..563
DNA (561bp) protein (187aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHZ9_RHOMR
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
qs_8_scaffold_3402_2
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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908..1129
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7Z1_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06570.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
qs_8_scaffold_3402_3

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1126..1467
DNA (342bp) protein (114aa)
Excinuclease ABC C subunit domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHG4_9ARCH
excinuclease ABC C subunit domain-containing protein
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:AEN06633.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_8_scaffold_3402_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1487..2710)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N9_SALRM
tyrS; tyrosyl-tRNA synthetase
qs_8_scaffold_3402_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2799..3335)
DNA (537bp) protein (179aa)
single-stranded DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B6935F
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_8_scaffold_3402_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3332..4183)
DNA (852bp) protein (284aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=309807 species=
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9P1_SALRM
hypothetical protein
qs_8_scaffold_3402_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4289..4636)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI03_RHOMR
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_8_scaffold_3402_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4806..5540)
DNA (735bp) protein (245aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4C3CB
qs_8_scaffold_3402_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5616..6182)
DNA (567bp) protein (189aa)
Ribosome maturation factor RimM n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG4_RHOM4
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Displaying 9 items

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