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qs_8_scaffold_1023

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_1023_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..240
DNA (240bp) protein (80aa)
Glycosyl transferase group 1 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLC2_RHOMR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEN74639.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_8_scaffold_1023_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

376..1536
DNA (1161bp) protein (387aa)
Glycosyl transferase group 1 n=2 Tax=Rhodothermus marinus RepID=D0MGP5_RHOM4
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACY49608.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_8_scaffold_1023_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1567..3876)
DNA (2310bp) protein (770aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACY47180.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACY47180.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Penicillin-binding protein, 1A family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI7_RHOM4
qs_8_scaffold_1023_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4200..4862
DNA (663bp) protein (221aa)
Rhomboid family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFN6_RHOMR
Rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AEN72206.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_1023_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5096..5737
DNA (642bp) protein (214aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFU3_RHOM4
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACY49432.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;
qs_8_scaffold_1023_6
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5975..6559)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VMX8_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX76968.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
qs_8_scaffold_1023_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6775..8028)
DNA (1254bp) protein (418aa)
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Salisaeta longa RepID=UPI0003B6B307
porB; 2-oxoacid:ferredoxin oxidoreductase subunit beta
2-oxoacid:ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:CBH23423.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_8_scaffold_1023_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8105..9964)
DNA (1860bp) protein (620aa)
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:AEN72274.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AEN72274.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Salisaeta longa RepID=UPI0003B3E4F1
qs_8_scaffold_1023_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10277..10537)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3FE82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23419.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1023_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10698..11564
DNA (867bp) protein (289aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000313|EMBL:CBH23418.1}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:00002
thymidylate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B4FC1C
thyA; thymidylate synthase
qs_8_scaffold_1023_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11586..12335)
DNA (750bp) protein (250aa)
3-oxoacyl-ACP synthase n=1 Tax=Salisaeta longa RepID=UPI0003B74B9B
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEN74698.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_8_scaffold_1023_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12602..13576)
DNA (975bp) protein (325aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CBH22962.1}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CBH22962.1};; TaxID=761659 spec
ACP S-malonyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B59810
fabD; Malonyl CoA-acyl carrier protein transacylase
qs_8_scaffold_1023_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13764..14756)
DNA (993bp) protein (331aa)
3-oxoacyl-ACP synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDV7_RHOMR
qs_8_scaffold_1023_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14864..15802)
DNA (939bp) protein (313aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH83_RHOM4
fatty acid/phospholipid synthesis protein PlsX
qs_8_scaffold_1023_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(16123..16317)
DNA (195bp) protein (65aa)
rpmF; 50S ribosomal protein L32
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=24656848 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_8_scaffold_1023_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16423..16938)
DNA (516bp) protein (172aa)
hypothetical protein
hypothetical protein; K07040 uncharacterized protein id=24656847 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22958.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1023_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17786..19531
DNA (1746bp) protein (582aa)
chromosomal replication initiation protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B2F6
dnaA; chromosomal replication initiator protein dnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_8_scaffold_1023_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19716..20852
DNA (1137bp) protein (379aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=309807 species="Bacter
DNA polymerase III subunit beta n=2 Tax=Salinibacter ruber RepID=D5H4G9_SALRM
dnaN; DNA polymerase III subunit beta
qs_8_scaffold_1023_19
Anoxybacillus gonensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20932..21501
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Anoxybacillus flavithermus AK1 RepID=M8DYN9_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KGP60626.1}; TaxID=198467 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus gonensis.;"
hypothetical protein
qs_8_scaffold_1023_20
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21605..22066)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000376514F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY46606.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
qs_8_scaffold_1023_21
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22033..22689)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FHW6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF09889.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
qs_8_scaffold_1023_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23278..23748)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B55C59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45501.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1023_23
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

24197..25855
DNA (1659bp) protein (553aa)
acetolactate synthase (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRK8_HALMO
Tax=BJP_IG2158_Zixibacteria_48_33
qs_8_scaffold_1023_24
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26015..26482)
DNA (468bp) protein (156aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKF87374.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
qs_8_scaffold_1023_25
unknown

Not on your lists

comp(27339..27545)
DNA (207bp) protein (69aa)

This feature has no annotations

qs_8_scaffold_1023_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28005..28985)
DNA (981bp) protein (327aa)
Helix-turn-helix type 11 domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLE0_RHOMR
helix-turn-helix type 11 domain-containing protein
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:AEN74657.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
qs_8_scaffold_1023_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29140..30459)
DNA (1320bp) protein (440aa)
nupC; Nucleoside permease
NupC family protein; K03317 concentrative nucleoside transporter, CNT family id=24657386 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NupC family protein {ECO:0000313|EMBL:ABC45113.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_8_scaffold_1023_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31086..31712)
DNA (627bp) protein (209aa)
Aminopeptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H686_SALRM
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:CBH23541.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
Displaying 28 items

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