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qs_8_scaffold_1621

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_1621_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..244
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA81_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24936.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1621_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

439..1113
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B46B08
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24433.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1621_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1003..1563)
DNA (561bp) protein (187aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B6F581
fxsA; FxsA cytoplasmic membrane protein
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:CBH24935.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qs_8_scaffold_1621_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2081..3139
DNA (1059bp) protein (353aa)
Flavin-containing amine-oxidoreductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4H4_9EURY
Flavin-containing amine-oxidoreductase {ECO:0000313|EMBL:EMA39285.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus h
FAD dependent oxidoreductase
qs_8_scaffold_1621_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3264..5093)
DNA (1830bp) protein (610aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000255|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000255|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000255|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=MEND_RUBXD
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
qs_8_scaffold_1621_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5143..6534)
DNA (1392bp) protein (464aa)
Isochorismate synthases n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS20_RUBXD
isochorismate synthase
Isochorismate synthases {ECO:0000313|EMBL:ABG05808.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
qs_8_scaffold_1621_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6683..7093)
DNA (411bp) protein (137aa)
Phosphoglycerate mutase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFF3_RHOM4
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ACY47480.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_1621_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7311..7952)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8V8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24463.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1621_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8365..9447
DNA (1083bp) protein (361aa)
prfA; peptide chain release factor 1
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 id=24659313 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_8_scaffold_1621_10
unknown

Not on your lists

9522..10031
DNA (510bp) protein (170aa)

This feature has no annotations

qs_8_scaffold_1621_11
unknown

Not on your lists

10142..10468
DNA (327bp) protein (109aa)

This feature has no annotations

qs_8_scaffold_1621_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


10898..11260
DNA (363bp) protein (121aa)
30S ribosomal protein S6 n=2 Tax=Salinibacter ruber RepID=Q2S2U2_SALRD
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000313|EMBL:CBH24481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_8_scaffold_1621_13
Porphyromonas sp. KLE 1280, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


11451..11666
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036C4AE8
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=997829 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. K
rpsR; 30S ribosomal protein S18
qs_8_scaffold_1621_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


11752..12207
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=1 Tax=Salisaeta longa RepID=UPI0003B78FC8
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_8_scaffold_1621_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12534..13100
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029S3_SOLUE
ECF subfamily RNA polymerase sigma-24 factor Tax=GWC2_Ignavibacteria_rel_36_12_curated
ECF subfamily RNA polymerase sigma-24 factor
qs_8_scaffold_1621_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13368..15836
DNA (2469bp) protein (823aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7A4D3
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG89364.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_8_scaffold_1621_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16255..17103
DNA (849bp) protein (283aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJQ1_RHOMR
50S ribosomal protein L11 methyltransferase
qs_8_scaffold_1621_18
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17363..19375)
DNA (2013bp) protein (671aa)
NarL family signal transduction histidine kinase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALU1_IGNAJ
NarL family signal transduction histidine kinase
NarL family signal transduction histidine kinase {ECO:0000313|EMBL:AFH49948.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.
qs_8_scaffold_1621_19
unknown

Not on your lists

comp(19807..20076)
DNA (270bp) protein (90aa)

This feature has no annotations

qs_8_scaffold_1621_20
unknown

Not on your lists

comp(20229..20546)
DNA (318bp) protein (106aa)

This feature has no annotations

qs_8_scaffold_1621_trna_1
unknown

Not on your lists

comp(20655..20727)
DNA (73bp)
transferRNA
qs_8_scaffold_1621_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20811..21788)
DNA (978bp) protein (326aa)
kbl; 2-amino-3-ketobutyrate coenzyme A ligase; K00639 glycine C-acetyltransferase [EC:2.3.1.29] id=24657233 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
kbl; glycine C-acetyltransferase
qs_8_scaffold_1621_22
unknown

Not on your lists

22514..22996
DNA (483bp) protein (161aa)

This feature has no annotations

qs_8_scaffold_1621_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23279..23770
DNA (492bp) protein (164aa)
Putative AsnC-family transcriptional regulator n=2 Tax=Salinibacter ruber RepID=D5H5S6_SALRM
lrp; AsnC family transcriptional regulator
Putative AsnC-family transcriptional regulator {ECO:0000313|EMBL:CBH23381.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_8_scaffold_1621_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23864..26050
DNA (2187bp) protein (729aa)
Glutamine synthetase catalytic region n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDB6_RHOM4
Glutamine synthetase catalytic region {ECO:0000313|EMBL:ACY49028.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
glutamine synthetase rbh
qs_8_scaffold_1621_25
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

26624..28078
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F1_SALRM
hypothetical protein Tax=CG_Ignavi_01
hypothetical protein
qs_8_scaffold_1621_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28130..28630
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22791.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_1621_27
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28737..29222)
DNA (486bp) protein (162aa)
putative copper-binding protein n=1 Tax=Streptomyces chartreusis RepID=UPI000262E6ED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW13462.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
qs_8_scaffold_1621_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29447..31441
DNA (1995bp) protein (665aa)
Chorismate binding enzyme n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1X7_SALRD
chorismate binding protein
Chorismate binding enzyme {ECO:0000313|EMBL:ABC46160.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_8_scaffold_1621_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31383..32105
DNA (723bp) protein (241aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-CoA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B4A533
acetate/CoA ligase
Displaying 30 items

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