ggKbase home page

qs_8_scaffold_2084

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_2084_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..869)
DNA (867bp) protein (289aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB7_RHOMR
qs_8_scaffold_2084_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1013..2818)
DNA (1806bp) protein (602aa)
Signal peptide peptidase SppA, 67K type {ECO:0000313|EMBL:ABC44539.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABC44539.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
signal peptide peptidase SppA n=1 Tax=Salisaeta longa RepID=UPI0003B6ADB8
sppA; signal peptide peptidase SppA, 67K type
qs_8_scaffold_2084_3
unknown

Not on your lists

3101..3556
DNA (456bp) protein (152aa)

This feature has no annotations

qs_8_scaffold_2084_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4276..5373
DNA (1098bp) protein (366aa)
HrcA family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B4770D
hrcA; Heat-inducible transcription repressor hrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
qs_8_scaffold_2084_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5474..6985
DNA (1512bp) protein (504aa)
Protein GrpE n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT8_SALRM
grpE; co-chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
qs_8_scaffold_2084_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7002..8258
DNA (1257bp) protein (419aa)
Chaperone protein DnaJ n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIQ4_RHOMR
chaperone protein dnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
qs_8_scaffold_2084_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8394..8933
DNA (540bp) protein (180aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIQ5_RHOMR
flavin reductase domain-containing FMN-binding protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AEN72683.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.
qs_8_scaffold_2084_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8867..9775)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B480
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25491.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_2084_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9792..10706)
DNA (915bp) protein (305aa)
serine dehydratase (EC:4.3.1.19)
serine/threonine dehydratase n=1 Tax=Salisaeta longa RepID=UPI0003B59443
Threonine dehydratase, catabolic {ECO:0000313|EMBL:EYF08461.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source=
qs_8_scaffold_2084_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10717..11052)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD87_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48999.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_2084_11
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11255..11509)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TI25_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY82522.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
qs_8_scaffold_2084_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11624..12502)
DNA (879bp) protein (293aa)
Phenylalanine-4-hydroxylase {ECO:0000313|EMBL:CBH25207.1}; EC=1.14.16.4 {ECO:0000313|EMBL:CBH25207.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
phenylalanine 4-monooxygenase n=1 Tax=Salisaeta longa RepID=UPI0003B3576C
phhA; phenylalanine-4-hydroxylase
qs_8_scaffold_2084_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12718..13287)
DNA (570bp) protein (190aa)
Peroxiredoxin n=2 Tax=Salinibacter ruber RepID=D5HB04_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46126.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_2084_14

Not on your lists

comp(13370..14062)
DNA (693bp) protein (231aa)
PhoU family transcriptional regulator n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289E7CC
Marine sediment metagenome DNA, contig: S03H2_S03744 {ECO:0000313|EMBL:GAH60812.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphate uptake regulator PhoU
qs_8_scaffold_2084_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14474..15844)
DNA (1371bp) protein (457aa)
Type II and III secretion system protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF16_RHOM4
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:ACY47466.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodo
qs_8_scaffold_2084_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16066..17100)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF15_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47465.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_2084_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17313..19169)
DNA (1857bp) protein (619aa)
Fimbrial assembly family protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF14_RHOM4
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ACY47464.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothe
qs_8_scaffold_2084_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19672..20988)
DNA (1317bp) protein (439aa)
Type II secretion system protein E n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF13_RHOM4
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACY47463.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
Displaying 18 items

View Taxonomy