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qs_8_scaffold_2843

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_2843_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..532
DNA (531bp) protein (177aa)
RNA polymerase sigma70 factor n=1 Tax=Salisaeta longa RepID=UPI0003B66971
ECF subfamily RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CBH22926.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qs_8_scaffold_2843_2
unknown

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775..1434
DNA (660bp) protein (220aa)

This feature has no annotations

qs_8_scaffold_2843_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1400..1744
DNA (345bp) protein (115aa)
hypothetical protein
hypothetical protein id=24656814 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABC45722.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_8_scaffold_2843_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1778..2146)
DNA (369bp) protein (123aa)
dfrA; dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3] id=24657264 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194, ECO:0000313|EMBL:CBH23412.1}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194, ECO:0000313|EMBL:CBH23412.1};; TaxID=761659 species="Bacteria; Bacteroi
dfrA; dihydrofolate reductase
qs_8_scaffold_2843_5
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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2471..3307
DNA (837bp) protein (279aa)
UbiA prenyltransferase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M847_ANAVT
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
UbiA prenyltransferase {ECO:0000313|EMBL:ABA22839.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
qs_8_scaffold_2843_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3399..4445
DNA (1047bp) protein (349aa)
DNA replication and repair protein RecF n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4N4_SALRM
recF; DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
qs_8_scaffold_2843_7
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(4467..5099)
DNA (633bp) protein (211aa)
Restriction endonuclease family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QPD5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKE99111.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
qs_8_scaffold_2843_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5191..6147)
DNA (957bp) protein (319aa)
Predicted Co/Zn/Cd cation transporters n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5I3_SALRM
mmt1; Co/Zn/Cd cation transporters
Predicted Co/Zn/Cd cation transporters {ECO:0000313|EMBL:CBH23288.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_8_scaffold_2843_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6253..7206)
DNA (954bp) protein (318aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862, ECO:0000313|EMBL:CBH25234.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
5,10-methylenetetrahydrofolate reductase n=1 Tax=Salisaeta longa RepID=UPI0003B67E82
metF; 5,10-methylenetetrahydrofolate reductase
qs_8_scaffold_2843_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7528..8595)
DNA (1068bp) protein (356aa)
extracellular solute-binding protein
extracellular solute-binding protein id=24657755 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:ABC45391.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_8_scaffold_2843_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8952..9890
DNA (939bp) protein (313aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCQ4_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABC44491.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_8_scaffold_2843_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9895..11136)
DNA (1242bp) protein (414aa)
N-acyl-L-amino acid amidohydrolase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2Q8_SALRD
N-acyl-L-amino acid amidohydrolase
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:ABC44933.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qs_8_scaffold_2843_13
unknown

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11193..11282
DNA (90bp) protein (30aa)

This feature has no annotations

qs_8_scaffold_2843_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11516..13555)
DNA (2040bp) protein (680aa)
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B59069
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AEN74300.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_8_scaffold_2843_15
unknown

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comp(13641..13817)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_8_scaffold_2843_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14261..16237)
DNA (1977bp) protein (659aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF32_RHOM4
PAS/PAC sensor signal transduction histidine kinase rbh
qs_8_scaffold_2843_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16543..17685)
DNA (1143bp) protein (381aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B57679
aroC; chorismate synthase
Displaying 17 items

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