ggKbase home page

qs_8_scaffold_5470

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_5470_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..156
DNA (156bp) protein (52aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; EC=1.6.99.5 {ECO:0000313|EMBL:CBH23392.1};; NADH dehydrogenase I subunit C {ECO
NADH-quinone oxidoreductase subunit C n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5J1_SALRD
nuoC; NADH-quinone oxidoreductase subunit C/D
qs_8_scaffold_5470_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

245..1630
DNA (1386bp) protein (462aa)
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] id=24657247 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa
qs_8_scaffold_5470_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1668..2408
DNA (741bp) protein (247aa)
nuoE; NADH dehydrogenase (ubiquinone), 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=24657248 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-ubiquinone oxidoreductase 24 kDa subunit
NADH-ubiquinone oxidoreductase 24 kDa subunit, putative {ECO:0000313|EMBL:ABC45977.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_8_scaffold_5470_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2604..3962
DNA (1359bp) protein (453aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B66F9F
Nqo1 {ECO:0000313|EMBL:AAY43000.1}; TaxID=29549 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (Rhodothermus ob
qs_8_scaffold_5470_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4134..5876
DNA (1743bp) protein (581aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:AEN72648.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AEN72648.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
NADH dehydrogenase (Quinone) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHD0_RHOMR
qs_8_scaffold_5470_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5949..6230
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6M6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23681.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_5470_7
unknown

Not on your lists

6227..6337
DNA (111bp) protein (37aa)

This feature has no annotations

qs_8_scaffold_5470_8
CG_Cyano_02, Cyanobacteria, Bacteria

Not on your lists

6288..6596
DNA (309bp) protein (103aa)
Clan AA aspartic protease, AF_0612 family n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GLP5_9CYAN
hypothetical protein Tax=CG_Cyano_02
hypothetical protein
qs_8_scaffold_5470_9
unknown

Not on your lists

6726..6851
DNA (126bp) protein (42aa)

This feature has no annotations

qs_8_scaffold_5470_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6967..10167)
DNA (3201bp) protein (1067aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442, ECO:0000313|EMBL:CBH25133.1}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442, ECO:0000313|EMBL:CBH25133.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Ba
DNA polymerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAS8_SALRM
pol; DNA polymerase
qs_8_scaffold_5470_11

Not on your lists

11575..12309
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379FF85
Uncharacterized protein {ECO:0000313|EMBL:KKN38444.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Na+/solute symporter
qs_8_scaffold_5470_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12722..12934
DNA (213bp) protein (71aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
dut; deoxyuridine 5`-triphosphate nucleotidohydrolase; K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=24657889 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
qs_8_scaffold_5470_13
Simkania negevensis, Simkania, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

12931..13155
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L398_SIMNZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB89736.1}; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
qs_8_scaffold_5470_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13274..13963
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H768_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23873.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_5470_15

Not on your lists

14293..15300
DNA (1008bp) protein (336aa)
LacI family transcription regulator n=1 Tax=mine drainage metagenome RepID=T1BCE1_9ZZZZ
LacI family transcription regulator {ECO:0000313|EMBL:EQD67537.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LacI family transcriptional regulator
qs_8_scaffold_5470_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15426..15719
DNA (294bp) protein (98aa)
Adenosine deaminase {ECO:0000313|EMBL:ABC44258.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ABC44258.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
adenosine deaminase n=1 Tax=Salisaeta longa RepID=UPI0003B7ABDF
adenosine deaminase
qs_8_scaffold_5470_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15658..16320
DNA (663bp) protein (221aa)
Adenosine deaminase {ECO:0000313|EMBL:CBH23770.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CBH23770.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
adenosine deaminase n=1 Tax=Salisaeta longa RepID=UPI0003B7ABDF
add; adenosine deaminase
Displaying 17 items

View Taxonomy