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qs_8_scaffold_1812

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_1812_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..268
DNA (267bp) protein (89aa)
Replication factor C small subunit 2 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W6P1_9EURY
replication factor C small subunit 2
Replication factor C small subunit 2 {ECO:0000313|EMBL:AGN00498.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
qs_8_scaffold_1812_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(436..1806)
DNA (1371bp) protein (457aa)
hydantoinase/carbamoylase family amidase (EC:3.5.1.87)
Hydantoinase/carbamoylase family amidase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LSG7_9EURY
Hydantoinase/carbamoylase family amidase {ECO:0000313|EMBL:EMA36083.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma laci
qs_8_scaffold_1812_3
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2035..2400)
DNA (366bp) protein (122aa)
Uncharacterized protein n=8 Tax=Pseudomonas syringae pv. actinidiae RepID=S6KT32_PSESF
Uncharacterized protein {ECO:0000313|EMBL:EPM65190.1}; TaxID=1104682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" sou
antibiotic biosynthesis monooxygenase
qs_8_scaffold_1812_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2658..3422)
DNA (765bp) protein (255aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M435_HALMO
qs_8_scaffold_1812_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3419..4168)
DNA (750bp) protein (250aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA; proteasome alpha subunit (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJT1_9EURY
qs_8_scaffold_1812_6

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4445..5341
DNA (897bp) protein (299aa)
uvsE; UV damage endonuclease (EC:3.-.-.-)
UV-damage endonuclease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y6V2_9ARCH
UV-damage endonuclease {ECO:0000313|EMBL:ESS08491.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
qs_8_scaffold_1812_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5461..5805
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D034_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28830.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_8_scaffold_1812_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5802..6191
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N212_9EURY
putative nucleic acid-binding protein, contains PIN domain
qs_8_scaffold_1812_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6202..8337)
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTL5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35744.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_8_scaffold_1812_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8538..8915)
DNA (378bp) protein (126aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXD9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA38111.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
qs_8_scaffold_1812_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8986..10020)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N861_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
radA; DNA repair and recombination protein RadA
qs_8_scaffold_1812_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10241..10858
DNA (618bp) protein (206aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVN8_9EURY
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA49666.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
acrR; DNA binding protein putative transcriptional regulator
qs_8_scaffold_1812_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11241..12065
DNA (825bp) protein (275aa)
Putative MFS transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2V6_9EURY
Putative MFS transporter {ECO:0000313|EMBL:ELZ29790.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
putative MFS transporter
qs_8_scaffold_1812_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12067..12951
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03001.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_8_scaffold_1812_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13869..16160)
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8V4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00964.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_8_scaffold_1812_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16151..17542)
DNA (1392bp) protein (464aa)
Glycosyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY76_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA50531.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
glycosyltransferase
qs_8_scaffold_1812_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17730..19394)
DNA (1665bp) protein (555aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MW40_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EMA49508.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
hypothetical protein
qs_8_scaffold_1812_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19659..21314)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MUV4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49507.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
Displaying 18 items

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