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qs_8_scaffold_3130

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_3130_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1174)
DNA (1173bp) protein (391aa)
Ribonuclease BN n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N0F7_HALMO
Ribonuclease BN {ECO:0000313|EMBL:EMA51361.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hypothetical protein
qs_8_scaffold_3130_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1195..2037)
DNA (843bp) protein (281aa)
Ribonuclease BN n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQQ6_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA35821.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
qs_8_scaffold_3130_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2277..3125)
DNA (849bp) protein (283aa)
Ribonuclease BN n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUP7_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA35820.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ribonuclease BN
qs_8_scaffold_3130_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3259..4434)
DNA (1176bp) protein (392aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC88_9EURY
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase / tRNA (guanine-N2-)-methyltransferase
qs_8_scaffold_3130_5
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4466..4918
DNA (453bp) protein (151aa)
Putative metal-binding protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AI77_NATGS
metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AFZ73516.1}; Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:ELY68372.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natr
qs_8_scaffold_3130_6
unknown

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5079..5378
DNA (300bp) protein (100aa)

This feature has no annotations

qs_8_scaffold_3130_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5864..6031)
DNA (168bp) protein (56aa)
Type i restriction-modification system methyltransferase subunit id=24647432 bin=uncultivated_archaeon_J07ABHX6 species=Haloarcula sinaiiensis genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08579.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_8_scaffold_3130_8
unknown

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6383..6595
DNA (213bp) protein (71aa)

This feature has no annotations

qs_8_scaffold_3130_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6677..7303)
DNA (627bp) protein (209aa)
DNA mismatch repair protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWU0_9EURY
DNA mismatch repair protein {ECO:0000313|EMBL:EMA49793.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
DNA mismatch repair protein MutS
qs_8_scaffold_3130_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7537..8373)
DNA (837bp) protein (279aa)
DNA mismatch repair protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAN4_9EURY
DNA mismatch repair protein {ECO:0000313|EMBL:EMA54628.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
DNA mismatch repair protein MutS
qs_8_scaffold_3130_11
unknown

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8549..8680
DNA (132bp) protein (44aa)

This feature has no annotations

qs_8_scaffold_3130_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8877..9881
DNA (1005bp) protein (335aa)
AIR synthase related protein domain protein n=3 Tax=Halococcus hamelinensis RepID=M0M6X0_9EURY
AIR synthase related protein domain protein {ECO:0000313|EMBL:EMA41542.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
hmf; hydrogenase expression/formation protein
qs_8_scaffold_3130_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9886..10146)
DNA (261bp) protein (87aa)
Uncharacterized protein id=24616040 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88011.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qs_8_scaffold_3130_14
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10211..10462)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B4G9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ05720.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
qs_8_scaffold_3130_15
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10648..11205)
DNA (558bp) protein (186aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Halonotius sp. J07HN4 RepID=U1P9W3_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERH07111.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
NMT1/THI5 like domain-containing protein
qs_8_scaffold_3130_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11202..11513)
DNA (312bp) protein (104aa)
NMT1/THI5 like domain-containing protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein id=24645783 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERH10002.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="ha
NMT1/THI5 like domain-containing protein
qs_8_scaffold_3130_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11571..12905)
DNA (1335bp) protein (445aa)
Drug resistance transporter, EmrB/QacA subfamily protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW17_9EURY
Drug resistance transporter, EmrB/QacA subfamily protein {ECO:0000313|EMBL:EFW91430.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" s
drug resistance transporter, EmrB/QacA subfamily
qs_8_scaffold_3130_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13130..13414
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW90371.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qs_8_scaffold_3130_19
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13528..14163)
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XUR6_9EURY
TetR family transcriptional regulator {ECO:0000313|EMBL:ELY65544.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme
regulatory protein TetR
qs_8_scaffold_3130_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14223..15386
DNA (1164bp) protein (388aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF01_9EURY
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:EMA55275.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
daunorubicin resistance ABC transporter ATPase subunit
Displaying 20 items

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