ggKbase home page

qs_8_scaffold_544

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_544_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1157..1480
DNA (324bp) protein (108aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX88_9EURY
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EFW90891.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Halada
glycerophosphoryl diester phosphodiesterase
qs_8_scaffold_544_2
unknown

Not on your lists

comp(1635..1742)
DNA (108bp) protein (36aa)

This feature has no annotations

qs_8_scaffold_544_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1782..1955)
DNA (174bp) protein (58aa)
Protein secretion chaperonin CsaA n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6R6_9EURY
Protein secretion chaperonin CsaA {ECO:0000313|EMBL:EMA41083.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameli
protein secretion chaperonin CsaA
qs_8_scaffold_544_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2221..3855
DNA (1635bp) protein (545aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1227455 species="Archaea; Euryarc
dnaG; probable bacterial-type DNA primase DnaG (EC:2.7.7.-)
DNA primase DnaG n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEB2_9EURY
qs_8_scaffold_544_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3991..5331)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPA8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW94024.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_8_scaffold_544_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5414..6022
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36213.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_8_scaffold_544_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6073..7020)
DNA (948bp) protein (316aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEB7_9EURY
qs_8_scaffold_544_8
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7046..7630
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BMI3_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ22072.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
qs_8_scaffold_544_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7955..8434
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47232.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_8_scaffold_544_10
unknown

Not on your lists

comp(8818..9063)
DNA (246bp) protein (82aa)

This feature has no annotations

qs_8_scaffold_544_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9094..10113
DNA (1020bp) protein (340aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
hemA; glutamyl-tRNA reductase (EC:1.2.1.-)
glutamyl-tRNA reductase n=1 Tax=Halomicrobium katesii RepID=UPI000366A1E5
qs_8_scaffold_544_12
unknown

Not on your lists

10311..10511
DNA (201bp) protein (67aa)

This feature has no annotations

qs_8_scaffold_544_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10789..11469
DNA (681bp) protein (227aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQV4_9EURY
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EFW93368.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hal
pgp; 3-phosphoglycerate kinase
qs_8_scaffold_544_14

Not on your lists

comp(11399..13411)
DNA (2013bp) protein (671aa)
Molybdopterin molybdochelatase {ECO:0000313|EMBL:ESS02480.1}; EC=2.10.1.1 {ECO:0000313|EMBL:ESS02480.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;
Molybdopterin molybdochelatase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJL0_9ARCH
molybdopterin molybdochelatase
qs_8_scaffold_544_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13628..13855
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQW1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93375.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qs_8_scaffold_544_16
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13855..14112
DNA (258bp) protein (86aa)
Cytotoxic translational repressor of toxin-antitoxin stability system n=2 Tax=Archaea RepID=U1NZH1_9EURY
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:ERH02929.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonot
RelE family protein
qs_8_scaffold_544_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14222..14539)
DNA (318bp) protein (106aa)
Small multidrug export protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC12_9EURY
Small multidrug export protein {ECO:0000313|EMBL:EMA43281.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
small multidrug export protein
qs_8_scaffold_544_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14673..15935)
DNA (1263bp) protein (421aa)
Molybdopterin molybdochelatase n=1 Tax=Halogranum salarium B-1 RepID=J3JEX7_9EURY
molybdenum cofactor synthesis domain-containing protein
Molybdopterin molybdochelatase {ECO:0000313|EMBL:EJN58751.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_8_scaffold_544_19
unknown

Not on your lists

16176..16742
DNA (567bp) protein (189aa)

This feature has no annotations

qs_8_scaffold_544_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16963..17442
DNA (480bp) protein (160aa)
Molecular chaperone n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEW5_9EURY
Molecular chaperone {ECO:0000313|EMBL:ELZ33353.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
heat shock protein 20
qs_8_scaffold_544_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17455..19002
DNA (1548bp) protein (516aa)
ABC-1 domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSR4_HALMO
ABC-1 domain-containing protein {ECO:0000313|EMBL:EMA48393.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
ABC transporter
Displaying 21 items

View Taxonomy