ggKbase home page

qs_8_scaffold_482

Search features with annotation key words

Displaying items 1-30 of 54 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_482_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25..1527)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8V4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00964.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_8_scaffold_482_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2125..3516)
DNA (1392bp) protein (464aa)
Phosphoglucosamine mutase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEH6_9EURY
Phosphoglucosamine mutase {ECO:0000313|EMBL:EMA43738.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
qs_8_scaffold_482_3
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3545..4192)
DNA (648bp) protein (216aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NYK1_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA62653.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lito
short-chain dehydrogenase/reductase SDR
qs_8_scaffold_482_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4189..4908)
DNA (720bp) protein (240aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAG5_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA42782.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase
qs_8_scaffold_482_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5122..5289)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4K5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52872.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_8_scaffold_482_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5502..6281
DNA (780bp) protein (260aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH33_9EURY
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:EMA43745.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
qs_8_scaffold_482_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6453..6611
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MDD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55139.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_8_scaffold_482_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6634..6885
DNA (252bp) protein (84aa)
UPF0213 protein NP_0776A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y776_NATPD
hypothetical protein
UPF0213 protein NP_0776A; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) (
qs_8_scaffold_482_9

Not on your lists

comp(6940..7497)
DNA (558bp) protein (186aa)
Putative flavoprotein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YKN2_9ARCH
Putative flavoprotein {ECO:0000313|EMBL:ESS12062.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
flavoprotein
qs_8_scaffold_482_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7936..9396
DNA (1461bp) protein (487aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBA8_9EURY
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:EMA55136.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
phosphomannomutase
qs_8_scaffold_482_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9500..9991)
DNA (492bp) protein (164aa)
Acetyltransferase (Gnat) family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M558_9EURY
Acetyltransferase (Gnat) family protein {ECO:0000313|EMBL:EMA40947.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
qs_8_scaffold_482_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10068..10262)
DNA (195bp) protein (65aa)
Thiamine biosynthesis protein ThiS ( sulfur donor) n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6C8_9EURY
Thiamine biosynthesis protein ThiS ( sulfur donor) {ECO:0000313|EMBL:EMA40948.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
hypothetical protein
qs_8_scaffold_482_13
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10622..11596
DNA (975bp) protein (325aa)
replication factor c small subunit; K04801 replication factor C small subunit id=24619443 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=10
rfcA; replication factor C small subunit
qs_8_scaffold_482_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11825..12349)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52950.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_8_scaffold_482_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12730..13359
DNA (630bp) protein (210aa)
Integrase family protein / sensor/bat box HTH-10 family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMK2_NATPD
GAF/PAS/PAC domain-containing protein
Integrase family protein / sensor/bat box HTH-10 family transcription regulator {ECO:0000313|EMBL:CAI50656.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
qs_8_scaffold_482_16
unknown

Not on your lists

13543..13845
DNA (303bp) protein (101aa)

This feature has no annotations

qs_8_scaffold_482_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13947..15662)
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW62_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91196.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_8_scaffold_482_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15904..17421)
DNA (1518bp) protein (506aa)
AryLSUlfotransferase (Asst) n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUU2_9EURY
AryLSUlfotransferase (Asst) {ECO:0000313|EMBL:ELZ26187.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallid
hypothetical protein
qs_8_scaffold_482_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17791..20628
DNA (2838bp) protein (946aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA5_9EURY
alanyl-tRNA synthetase
qs_8_scaffold_482_20
unknown

Not on your lists

comp(20932..21186)
DNA (255bp) protein (85aa)

This feature has no annotations

qs_8_scaffold_482_21
unknown

Not on your lists

comp(21379..21741)
DNA (363bp) protein (121aa)

This feature has no annotations

qs_8_scaffold_482_22
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22026..23471)
DNA (1446bp) protein (482aa)
Metal-dependent cyclase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQ31_9EURY
Metal-dependent cyclase {ECO:0000313|EMBL:ELY50448.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_8_scaffold_482_23

Not on your lists

24081..25178
DNA (1098bp) protein (366aa)
Threonine dehydrogenase related Zn-dependent dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y233_9ARCH
Threonine dehydrogenase related Zn-dependent dehydrogenase {ECO:0000313|EMBL:ESS06651.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
threonine dehydrogenase
qs_8_scaffold_482_24
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25347..26624
DNA (1278bp) protein (426aa)
Deacylase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DDB6_9EURY
Deacylase {ECO:0000313|EMBL:ELZ32808.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
deacylase
qs_8_scaffold_482_25
unknown

Not on your lists

comp(26672..26956)
DNA (285bp) protein (95aa)

This feature has no annotations

qs_8_scaffold_482_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27176..27871
DNA (696bp) protein (232aa)
Short-chain family oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7F2_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:EMA53483.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
qs_8_scaffold_482_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28080..28940
DNA (861bp) protein (287aa)
Zinc transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF54_9EURY
Zinc transporter {ECO:0000313|EMBL:EMA43973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
zip; zinc transporter
qs_8_scaffold_482_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29099..29575
DNA (477bp) protein (159aa)
Bacterioferritin comigrating protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M181_9EURY
Bacterioferritin comigrating protein {ECO:0000313|EMBL:EMA39552.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ham
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
qs_8_scaffold_482_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29733..30407)
DNA (675bp) protein (225aa)
HAD-superfamily hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGV0_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EMA44941.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
HAD-superfamily hydrolase
qs_8_scaffold_482_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30556..32046
DNA (1491bp) protein (497aa)
Cytochrome P450 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQM1_NATM8
cyc1; cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:CCQ36470.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain D
Displaying items 1-30 of 54 in total

View Taxonomy