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qs_8_scaffold_4081

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_4081_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(173..436)
DNA (264bp) protein (88aa)
Copper-translocating P-type ATPase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9W6_9EURY
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ELZ31598.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
qs_8_scaffold_4081_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(523..1092)
DNA (570bp) protein (190aa)
Methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ74_9EURY
Methyltransferase {ECO:0000313|EMBL:EMA47877.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
prmC; methylase
qs_8_scaffold_4081_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1092..2255)
DNA (1164bp) protein (388aa)
Mechanosensitive ion channel MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR92_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA47878.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
mechanosensitive ion channel MscS
qs_8_scaffold_4081_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2383..2568)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49054.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_8_scaffold_4081_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2626..3504)
DNA (879bp) protein (293aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB8_9EURY
qs_8_scaffold_4081_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3584..4171)
DNA (588bp) protein (196aa)
RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA49056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
RNA-binding protein
qs_8_scaffold_4081_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4211..4567)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY
qs_8_scaffold_4081_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4564..4716)
DNA (153bp) protein (51aa)
50S ribosomal protein L21e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUS4_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L21e
Displaying 8 items

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