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qs_8_scaffold_6122

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_6122_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..98)
DNA (96bp) protein (32aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY67_9EURY
qs_8_scaffold_6122_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(276..1010)
DNA (735bp) protein (245aa)
gpmB; fructose-2,6-bisphosphatase; phosphoglyceromutase, type 2 (EC:5.4.2.1 3.1.3.46)
Phosphoglycerate mutase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3B3_9EURY
Phosphoglycerate mutase {ECO:0000313|EMBL:ELZ29182.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_8_scaffold_6122_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1057..2463)
DNA (1407bp) protein (469aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2V9_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source
Sec-independent periplasmic protein translocase
qs_8_scaffold_6122_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2611..3627
DNA (1017bp) protein (339aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4T6_9EURY
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:ELZ29184.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
tatC_2; sec-independent protein translocase component TatC 2
qs_8_scaffold_6122_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3952..4641
DNA (690bp) protein (230aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4T6_9EURY
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:ELZ29184.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
tatC1; Sec-independent protein translocase protein TatC
qs_8_scaffold_6122_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4751..4924
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003798F59
transcription regulator
CopG domain protein {ECO:0000313|EMBL:CAI48767.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_8_scaffold_6122_7
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4914..5627
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HS35_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ87311.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qs_8_scaffold_6122_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5659..5895)
DNA (237bp) protein (79aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1D9_HALMD
ribosomal RNA methyltransferase RrmJ/FtsJ
Displaying 8 items

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