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qs_9_scaffold_1818

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1818_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..1018
DNA (1017bp) protein (339aa)
recombination factor protein RarA
ATPase, AAA family protein {ECO:0000313|EMBL:ABC44402.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
recombination factor protein RarA; K07478 putative ATPase id=24658909 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_9_scaffold_1818_2
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1165..2268)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXK9_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI14611.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain D
qs_9_scaffold_1818_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2507..3025
DNA (519bp) protein (173aa)
hypothetical protein id=24657760 bin=Salinibacter_ruber species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03667.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantia
qs_9_scaffold_1818_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3134..4207
DNA (1074bp) protein (358aa)
Putative ATPase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H606_SALRM
ATPase
Putative ATPase {ECO:0000313|EMBL:CBH23461.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
qs_9_scaffold_1818_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4247..5041)
DNA (795bp) protein (265aa)
hypothetical protein
hypothetical protein id=24658171 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25376.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_1818_6
unknown

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comp(5139..5708)
DNA (570bp) protein (190aa)

This feature has no annotations

qs_9_scaffold_1818_7
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6109..7038)
DNA (930bp) protein (310aa)
Asparaginase {ECO:0000313|EMBL:ETN93994.1}; EC=3.4.19.5 {ECO:0000313|EMBL:ETN93994.1};; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" s
asparaginase (EC:3.5.1.1)
asparaginase n=1 Tax=Salisaeta longa RepID=UPI0003B682EF
qs_9_scaffold_1818_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7564..8223
DNA (660bp) protein (220aa)
rpoE; RNA polymerase sigma-E factor
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658709 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25894.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_9_scaffold_1818_trna_2
unknown

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comp(8743..8828)
DNA (86bp)
transferRNA
qs_9_scaffold_1818_trna_1
unknown

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9117..9188
DNA (72bp)
transferRNA
qs_9_scaffold_1818_9
unknown

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comp(9128..9385)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_9_scaffold_1818_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9717..10085
DNA (369bp) protein (123aa)
Uncharacterized conserved membrane protein n=2 Tax=Salinibacter ruber RepID=Q2S2N1_SALRD
hypothetical protein
Uncharacterized conserved membrane protein {ECO:0000313|EMBL:ABC44849.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_9_scaffold_1818_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10278..10943
DNA (666bp) protein (222aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA9_RHOMR
qs_9_scaffold_1818_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11204..11779)
DNA (576bp) protein (192aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroi
Shikimate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFA7_RHOM4
qs_9_scaffold_1818_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11979..12560
DNA (582bp) protein (194aa)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=TRUA_SALRD
truA; tRNA pseudouridine synthase A
qs_9_scaffold_1818_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13186..13602
DNA (417bp) protein (139aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44110.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24658362 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_9_scaffold_1818_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13662..14096
DNA (435bp) protein (145aa)
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIB4_RHOM4
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEN73314.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_9_scaffold_1818_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14443..14634
DNA (192bp) protein (64aa)
HTH-type transcriptional regulator celR {ECO:0000313|EMBL:ABC45871.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_9_scaffold_1818_17
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(14663..14938)
DNA (276bp) protein (92aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I {ECO:0000313|EMBL:AGY59939.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AGY59939.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gl
DNA topoisomerase I n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQP3_9CYAN
Displaying 19 items

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