ggKbase home page

qs_9_scaffold_145

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_145_1
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..275)
DNA (273bp) protein (91aa)
Partition protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CNZ3_NATSJ
partition protein
Partition protein {ECO:0000313|EMBL:AFO59549.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
qs_9_scaffold_145_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1620..2792
DNA (1173bp) protein (391aa)
Xylose dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY12_9EURY
Xylose dehydrogenase {ECO:0000313|EMBL:EFW90478.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
xylose dehydrogenase
qs_9_scaffold_145_3
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3232..3504)
DNA (273bp) protein (91aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
Glycerol-3-phosphate dehydrogenase subunit A n=2 Tax=Halobacterium salinarum RepID=B0R6S3_HALS3
gpdA2; glycerol-3-phosphate dehydrogenase chain A
qs_9_scaffold_145_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3516..3929)
DNA (414bp) protein (138aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source=
Glycerol-3-phosphate dehydrogenase n=1 Tax=halophilic archaeon J07HX5 RepID=U1MFU2_9EURY
FAD dependent oxidoreductase
qs_9_scaffold_145_5
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4024..6501)
DNA (2478bp) protein (826aa)
Alpha-glucosidase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NSD1_9EURY
Alpha-glucosidase {ECO:0000313|EMBL:EMA60681.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
alpha-glucosidase
qs_9_scaffold_145_6
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6559..8019)
DNA (1461bp) protein (487aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EFC94149.1}; EC=1.2.1.- {ECO:0000313|EMBL:EFC94149.1};; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TU69_9EURY
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
qs_9_scaffold_145_7

Not on your lists

8161..9060
DNA (900bp) protein (300aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVZ9_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS04376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
dihydrodipicolinate synthase
qs_9_scaffold_145_8
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(9242..10525)
DNA (1284bp) protein (428aa)
Trehalose/maltose binding protein (Fragment) n=1 Tax=Thermosipho africanus H17ap60334 RepID=K2PJ88_9THEM
sugar ABC transporter periplasmic sugar-binding protein Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
twin-arginine translocation pathway signal protein
qs_9_scaffold_145_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10625..11623)
DNA (999bp) protein (333aa)
(R)-2-hydroxyacid dehydrogenase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGH3_9EURY
(R)-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:GAD53366.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
(R)-2-hydroxyacid dehydrogenase
qs_9_scaffold_145_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11631..12794)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI0003683DA1
Uncharacterized protein {ECO:0000313|EMBL:KJS18889.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
carbohydrate hydrolase
qs_9_scaffold_145_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12861..13166)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI00036D394A
SAF domain protein {ECO:0000313|EMBL:ELZ15429.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
altronate dehydratase
qs_9_scaffold_145_12
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13220..14215)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MB12_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41834.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qs_9_scaffold_145_13
unknown

Not on your lists

comp(14217..14375)
DNA (159bp) protein (53aa)

This feature has no annotations

qs_9_scaffold_145_14
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14506..15483
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ASP0_THEM3
binding-protein-dependent transport systems inner membrane component
ABC transporter permease {ECO:0000313|EMBL:KHO60967.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoan
qs_9_scaffold_145_15
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15485..16351
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI0003613F9C
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJF16827.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" sour
ABC-type sugar transport system, permease component
qs_9_scaffold_145_16

Not on your lists

comp(16435..17403)
DNA (969bp) protein (323aa)
Lactate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFV0_9ARCH
Lactate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS06999.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
phosphoglycerate dehydrogenase-like oxidoreductase
qs_9_scaffold_145_17

Not on your lists

comp(17465..18724)
DNA (1260bp) protein (420aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP64_9ARCH
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS04375.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
mandelate racemase/muconate lactonizing protein
qs_9_scaffold_145_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18970..20124
DNA (1155bp) protein (385aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAX3_9EURY
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ32635.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sugar ABC transporter ATP-binding protein
qs_9_scaffold_145_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20357..21139
DNA (783bp) protein (261aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP7_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ27985.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
IclR family transcriptional regulator
qs_9_scaffold_145_20
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

22052..23587
DNA (1536bp) protein (512aa)
Carbohydrate kinase FGGY n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH75_THET1
carbohydrate kinase FGGY
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACZ43096.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
qs_9_scaffold_145_21
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23686..23955
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HNK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ86165.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qs_9_scaffold_145_22
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24346..25638
DNA (1293bp) protein (431aa)
SAF domain protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKW5_HALHG
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ADQ15706.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Ha
qs_9_scaffold_145_23
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25763..27208
DNA (1446bp) protein (482aa)
Extracellular solute-binding protein family 1 n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIF7_KOSOT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL36040.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846
extracellular solute-binding protein family 1
qs_9_scaffold_145_24
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

27205..28131
DNA (927bp) protein (309aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I666_CALAS
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM00754.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerop
qs_9_scaffold_145_25
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

28121..28960
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIF6_KOSOT
transport protein
Tax=BJP_IG2158_Anaerolineales_38_74
qs_9_scaffold_145_26
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29050..30162
DNA (1113bp) protein (371aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KVR7_9EURY
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA25341.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
sugar ABC transporter ATP-binding protein
qs_9_scaffold_145_27
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30251..30610
DNA (360bp) protein (120aa)
Alcohol dehydrogenase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0ALX5_9EURY
Alcohol dehydrogenase {ECO:0000313|EMBL:ELY98388.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
alcohol dehydrogenase GroES-like protein
Displaying 27 items

View Taxonomy