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qs_9_scaffold_1375

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1375_1
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(105..2927)
DNA (2823bp) protein (941aa)
CRISPR-associated nuclease/helicase Cas3 {ECO:0000303|PubMed:22767603}; EC=3.1.-.-;; EC=3.6.4.-;; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;
CRISPR-associated helicase Cas3 n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQN8_HALVD
cas3; CRISPR-associated helicase Cas3
qs_9_scaffold_1375_2
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2927..3790)
DNA (864bp) protein (288aa)
CRISPR-associated protein Cas5, Hmari subtype n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQN7_HALVD
cas5; CRISPR-associated protein Cas5, Hmari subtype
CRISPR-associated protein Cas5 {ECO:0000303|PubMed:24459147}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain
qs_9_scaffold_1375_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3794..4861)
DNA (1068bp) protein (356aa)
CRISPR-associated protein, Csh2 family n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LCL7_9EURY
CRISPR-associated protein, Csh2 family {ECO:0000313|EMBL:EMA30169.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisa
csh2; CRISPR-associated protein, Csh2 family
qs_9_scaffold_1375_4
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4888..7119)
DNA (2232bp) protein (744aa)
CRISPR-associated Csh1 family protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ICS6_9EURY
CRISPR-associated protein (Cas_TM1802) {ECO:0000313|EMBL:CQR53160.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc
CRISPR-associated protein, Csh1 family
qs_9_scaffold_1375_5
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7116..7928)
DNA (813bp) protein (271aa)
CRISPR-associated protein Cas6 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0E5_HALMD
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:KDE57093.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
CRISPR-associated protein Cas6
qs_9_scaffold_1375_6
unknown

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comp(7916..8161)
DNA (246bp) protein (82aa)

This feature has no annotations

qs_9_scaffold_1375_7
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8482..8949
DNA (468bp) protein (156aa)
CRISPR-associated protein Cas4 n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQN9_HALVD
cas4; CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ELY32096.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain
qs_9_scaffold_1375_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8953..9948
DNA (996bp) protein (332aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
CRISPR-associated endonuclease Cas1 n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JJK3_9EURY
CRISPR-associated protein Cas1
qs_9_scaffold_1375_9
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9948..10208
DNA (261bp) protein (87aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000255|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01471};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQP1_HALVD
cas2; CRISPR-associated protein Cas2
qs_9_scaffold_1375_10
unknown

Not on your lists

13358..13483
DNA (126bp) protein (42aa)

This feature has no annotations

qs_9_scaffold_1375_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14513..16867
DNA (2355bp) protein (785aa)
thermosome id=24616574 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Thermosome subunit {ECO:0000313|EMBL:ESP87549.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
thermosome
qs_9_scaffold_1375_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16864..18357
DNA (1494bp) protein (498aa)
(R)-6-hydroxynicotine oxidase (EC:1.5.3.6) id=24616572 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
(R)-6-hydroxynicotine oxidase (EC:1.5.3.6)
(R)-6-hydroxynicotine oxidase {ECO:0000313|EMBL:ESP87547.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
qs_9_scaffold_1375_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18624..19703
DNA (1080bp) protein (360aa)
adh7; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DRD7_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ELZ37252.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum t
qs_9_scaffold_1375_14
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20180..20977
DNA (798bp) protein (266aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M883_9EURY
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:AKH96533.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" sour
DNA methylase N-4/N-6 domain-containing protein
qs_9_scaffold_1375_15
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21493..22077
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M9D3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH96534.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
qs_9_scaffold_1375_trna_1
unknown

Not on your lists

comp(22260..22332)
DNA (73bp)
transferRNA
qs_9_scaffold_1375_16
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22557..23117)
DNA (561bp) protein (187aa)
Ferredoxin n=1 Tax=halophilic archaeon J07HB67 RepID=U1R1M4_9EURY
Ferredoxin {ECO:0000313|EMBL:ERH12237.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
ferredoxin
qs_9_scaffold_1375_17
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23224..24150)
DNA (927bp) protein (309aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R5R3_HALMT
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:ELZ92972.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax m
qs_9_scaffold_1375_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24189..24854
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J971_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16340.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
Displaying 19 items

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