ggKbase home page

qs_9_scaffold_2201

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2201_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..1383
DNA (1383bp) protein (461aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MT84_9EURY
protoheme IX farnesyltransferase
qs_9_scaffold_2201_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1474..1905
DNA (432bp) protein (144aa)
Ntp pyrophosphohydrolase n=1 Tax=Halogranum salarium B-1 RepID=J2ZL60_9EURY
Ntp pyrophosphohydrolase {ECO:0000313|EMBL:EJN61480.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NUDIX hydrolase
qs_9_scaffold_2201_3
unknown

Not on your lists

comp(1910..2038)
DNA (129bp) protein (43aa)

This feature has no annotations

qs_9_scaffold_2201_4
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2265..2675
DNA (411bp) protein (137aa)
Prefoldin subunit beta n=1 Tax=Natronococcus occultus SP4 RepID=L0JWZ4_9EURY
prefoldin, beta subunit, archaeal
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
qs_9_scaffold_2201_5
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2682..2978
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A3T6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92532.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
qs_9_scaffold_2201_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3053..4165
DNA (1113bp) protein (371aa)
cellulase (EC:3.2.1.4)
Peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY40_9EURY
Peptidase {ECO:0000313|EMBL:EMA50642.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
qs_9_scaffold_2201_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4442..5446
DNA (1005bp) protein (335aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME56_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
multidrug ABC transporter ATPase
qs_9_scaffold_2201_8
unknown

Not on your lists

comp(5604..5765)
DNA (162bp) protein (54aa)

This feature has no annotations

qs_9_scaffold_2201_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5891..6211
DNA (321bp) protein (107aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUB3_9EURY
ABC transporter {ECO:0000313|EMBL:EMA49216.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ABC transporter
qs_9_scaffold_2201_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6384..6788
DNA (405bp) protein (135aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
qs_9_scaffold_2201_11
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

6910..7863
DNA (954bp) protein (318aa)
Adenine-specific DNA methylase containing a Zn-ribbon n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYA1_METI4
adenine-specific DNA methylase containing a Zn-ribbon
Adenine-specific DNA methylase containing a Zn-ribbon {ECO:0000313|EMBL:ACD82378.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphil
qs_9_scaffold_2201_12
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

7976..8980
DNA (1005bp) protein (335aa)
Adenine-specific DNA methylase containing a Zn-ribbon n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYA1_METI4
adenine-specific DNA methylase containing a Zn-ribbon
Adenine-specific DNA methylase containing a Zn-ribbon {ECO:0000313|EMBL:ACD82378.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphil
qs_9_scaffold_2201_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

8980..9270
DNA (291bp) protein (97aa)
Superfamily I DNA and RNA helicases and helicase subunits-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV29_RUBXD
superfamily I DNA/RNA helicase
Superfamily I DNA and RNA helicases and helicase subunits-like protein {ECO:0000313|EMBL:ABG04749.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae;
qs_9_scaffold_2201_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

9270..13247
DNA (3978bp) protein (1326aa)
Superfamily I DNA and RNA helicases and helicase subunits-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV29_RUBXD
superfamily I DNA/RNA helicase
Superfamily I DNA and RNA helicases and helicase subunits-like protein {ECO:0000313|EMBL:ABG04749.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae;
qs_9_scaffold_2201_trna_1
unknown

Not on your lists

comp(13366..13436)
DNA (71bp)
transferRNA
qs_9_scaffold_2201_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13520..14062)
DNA (543bp) protein (181aa)
Methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3P7_HALMO
Methyltransferase {ECO:0000313|EMBL:EMA40437.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
methyltransferase type 11
qs_9_scaffold_2201_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14203..15075)
DNA (873bp) protein (291aa)
Type II secretion system protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIG7_9EURY
type II secretion system, protein F
Type II secretion system protein {ECO:0000313|EMBL:ERJ07059.1}; Type II secretion system, protein F {ECO:0000313|EMBL:CCQ34825.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobact
qs_9_scaffold_2201_17

Not on your lists

comp(15051..16238)
DNA (1188bp) protein (396aa)
Archaeal flagella assembly protein J n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y1Q2_9ARCH
Archaeal flagella assembly protein J {ECO:0000313|EMBL:ESS04867.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
type II secretion system, protein F
qs_9_scaffold_2201_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16235..18223)
DNA (1989bp) protein (663aa)
Type II secretion system protein E n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBQ2_HALXS
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AEH38320.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (s
Displaying 19 items

View Taxonomy