ggKbase home page

qs_9_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 51 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_297_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..391
DNA (390bp) protein (130aa)
peptidase M16 n=1 Tax=Salisaeta longa RepID=UPI0003B69895
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AEN73328.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_9_scaffold_297_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

611..1225
DNA (615bp) protein (205aa)
Gll3852 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NEM7_GLOVI
hypothetical protein
Gll3852 protein {ECO:0000313|EMBL:BAC91793.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
qs_9_scaffold_297_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1248..1823)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P8_SALRM
PspC domain-containing protein
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qs_9_scaffold_297_4
unknown

Not on your lists

comp(1949..2242)
DNA (294bp) protein (98aa)

This feature has no annotations

qs_9_scaffold_297_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2333..2803)
DNA (471bp) protein (157aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salisaeta longa RepID=UPI0003B5382B
5-formyltetrahydrofolate cyclo-ligase
qs_9_scaffold_297_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2989..3423
DNA (435bp) protein (145aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sp
alkylhydroperoxidase n=1 Tax=Salisaeta longa RepID=UPI0003B3487B
alkylhydroperoxidase
qs_9_scaffold_297_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4176..4850
DNA (675bp) protein (225aa)
signal recognition particle n=1 Tax=Salisaeta longa RepID=UPI0003B50670
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306, ECO:0000313|EMBL:CBH24751.1}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=761659 species="Bacteria; Bacteroidetes;
qs_9_scaffold_297_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4998..5744
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4069E
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_9_scaffold_297_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5816..6391
DNA (576bp) protein (192aa)
Ribosome maturation factor RimM n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI05_RHOMR
ribosome maturation factor rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_9_scaffold_297_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6470..7240
DNA (771bp) protein (257aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4C3CB
qs_9_scaffold_297_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


7373..7726
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI03_RHOMR
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_9_scaffold_297_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7842..8696
DNA (855bp) protein (285aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_9_scaffold_297_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8789..9250
DNA (462bp) protein (154aa)
smpB; SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=24659583 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_9_scaffold_297_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9344..10567
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
Tyrosine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYY_SALRD
tyrS; tyrosyl-tRNA synthetase
qs_9_scaffold_297_15

Not on your lists

comp(10675..10917)
DNA (243bp) protein (81aa)
Excinuclease ABC C subunit domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHG4_9ARCH
excinuclease ABC C subunit domain-containing protein
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:AEN06633.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_297_16
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11038..11484)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7Z1_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06570.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
qs_9_scaffold_297_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11620..12162)
DNA (543bp) protein (181aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N7_SALRM
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
qs_9_scaffold_297_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12181..13389)
DNA (1209bp) protein (403aa)
Phosphoribosylaminoimidazole carboxylase ATPase-subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N6_SALRM
purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
qs_9_scaffold_297_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13511..16429)
DNA (2919bp) protein (973aa)
DNA translocase ftsK n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N5_SALRM
ftsK; DNA translocase ftsK
DNA translocase ftsK {ECO:0000313|EMBL:CBH24740.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_9_scaffold_297_20
unknown

Not on your lists

16605..17057
DNA (453bp) protein (151aa)

This feature has no annotations

qs_9_scaffold_297_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17106..17867)
DNA (762bp) protein (254aa)
comB; 2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] id=24659577 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490, ECO:0000313|EMBL:CBH24739.1}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=761659 species="Bacteria; Bacteroidetes
comB; 2-phosphosulfolactate phosphatase
qs_9_scaffold_297_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18093..19109)
DNA (1017bp) protein (339aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
Aminomethyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJN0_RHOM4
glycine cleavage system T protein
qs_9_scaffold_297_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19323..20210)
DNA (888bp) protein (296aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:ACY48687.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ACY48687.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Prephenate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJM9_RHOM4
qs_9_scaffold_297_24
bacterium UASB270, Bacteria

Not on your lists

20451..21011
DNA (561bp) protein (187aa)
rhomboid family protein n=1 Tax=Salisaeta longa RepID=UPI0003B3E02D
Rhomboid family protein {ECO:0000313|EMBL:GAK56243.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
protease
qs_9_scaffold_297_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21054..21743
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H8S5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45773.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_297_26
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22078..22890)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J490_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57468.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
qs_9_scaffold_297_27
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(23014..26709)
DNA (3696bp) protein (1232aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B2FD98
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
qs_9_scaffold_297_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27029..27772
DNA (744bp) protein (248aa)
phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=762570
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK45_RHOMR
qs_9_scaffold_297_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27832..28821
DNA (990bp) protein (330aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK46_RHOMR
CDP-diacylglycerol/serine O-phosphatidyltransferase
CDP-diacylglycerol/serine O-phosphatidyltransferase {ECO:0000313|EMBL:AEN72802.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.
qs_9_scaffold_297_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28882..29178
DNA (297bp) protein (99aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
phosphoribosylformylglycinamidine synthase n=1 Tax=Salisaeta longa RepID=UPI0003B5C15B
purL; phosphoribosylformylglycinamidine (FGAM) synthase
Displaying items 1-30 of 51 in total

View Taxonomy