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qs_9_scaffold_4088

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_4088_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..331)
DNA (330bp) protein (110aa)
proteasome endopeptidase complex protein (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
proteasome subunit beta n=1 Tax=Halomicrobium katesii RepID=UPI0003669C8E
qs_9_scaffold_4088_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(324..965)
DNA (642bp) protein (214aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJT1_9EURY
qs_9_scaffold_4088_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1108..1446)
DNA (339bp) protein (113aa)
peptidyl-tRNA hydrolase, PTH2 family (EC:3.1.1.29) id=24649061 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ERH10194.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ERH10194.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic ar
peptidyl-tRNA hydrolase (EC:3.1.1.29)
qs_9_scaffold_4088_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1604..3622
DNA (2019bp) protein (673aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V4J6_HALMA
ATPase
ATPase {ECO:0000313|EMBL:AJF26643.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_9_scaffold_4088_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3683..4327)
DNA (645bp) protein (215aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK56_9EURY
qs_9_scaffold_4088_trna_1
unknown

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4519..4593
DNA (75bp)
transferRNA
qs_9_scaffold_4088_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4704..5564)
DNA (861bp) protein (287aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halobacterium sp. DL1 RepID=G4IF06_9EURY
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHG03653.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacter
NAD-dependent epimerase/dehydratase
qs_9_scaffold_4088_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6026..6160)
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90970.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qs_9_scaffold_4088_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6195..7154)
DNA (960bp) protein (320aa)
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF7_9EURY
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ELZ25471.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimp
nuclease
qs_9_scaffold_4088_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7232..8218)
DNA (987bp) protein (329aa)
nuclease id=24644951 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain protein {ECO:0000313|EMBL:ERH09166.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
nuclease-like protein
qs_9_scaffold_4088_10
unknown

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comp(8320..8442)
DNA (123bp) protein (41aa)

This feature has no annotations

qs_9_scaffold_4088_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8655..9383
DNA (729bp) protein (243aa)
DNA binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9V3L6_HALBP
DNA binding protein {ECO:0000313|EMBL:ELY31795.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (st
DNA binding protein
qs_9_scaffold_4088_12

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9501..10598
DNA (1098bp) protein (366aa)
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=halophilic archaeon DL31 RepID=G2MMI1_9ARCH
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:AEN06380.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_4088_13
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10721..10873
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJZ5_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB31840.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_9_scaffold_4088_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10895..11098
DNA (204bp) protein (68aa)
ArsR family transcriptional regulator n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NDP7_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMA55214.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus th
putative transcriptional regulator
Displaying 15 items

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