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qs_9_scaffold_1334

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1334_1
unknown

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3..74
DNA (72bp) protein (24aa)

This feature has no annotations

qs_9_scaffold_1334_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

500..2173
DNA (1674bp) protein (558aa)
DNA repair protein RecN n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4E5_SALRD
recN; DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_9_scaffold_1334_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2555..3211)
DNA (657bp) protein (219aa)
Transcriptional repressor, LexA family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL94_RHOMR
LexA family transcriptional repressor
Transcriptional repressor, LexA family {ECO:0000313|EMBL:AEN74611.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_9_scaffold_1334_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3625..4068
DNA (444bp) protein (148aa)
Protein MraZ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A4_SALRM
mraZ; protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
qs_9_scaffold_1334_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4297..5319
DNA (1023bp) protein (341aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A5_SALRM
mraW; S-adenosyl-methyltransferase mraW
qs_9_scaffold_1334_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5440..5877
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B79C3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23561.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_1334_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5978..7960
DNA (1983bp) protein (661aa)
penicillin-binding protein 3 n=1 Tax=Salisaeta longa RepID=UPI0003B6158D
ftsI; penicillin-binding protein 3
Penicillin-binding protein 3 {ECO:0000313|EMBL:CBH23562.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_9_scaffold_1334_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8066..9661
DNA (1596bp) protein (532aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S532_SALRD
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
qs_9_scaffold_1334_9
unknown

Not on your lists

9862..10527
DNA (666bp) protein (222aa)

This feature has no annotations

qs_9_scaffold_1334_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10470..10778
DNA (309bp) protein (103aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Salisaeta longa RepID=UPI0003B70C7D
phospho-N-acetylmuramoyl-pentapeptide-transferase
qs_9_scaffold_1334_11
unknown

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comp(10670..10879)
DNA (210bp) protein (70aa)

This feature has no annotations

qs_9_scaffold_1334_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10937..12385
DNA (1449bp) protein (483aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL87_RHOMR
UDP-N-acetylmuramoylalanine--D-glutamate ligase
qs_9_scaffold_1334_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12515..13657
DNA (1143bp) protein (381aa)
Cell division protein FtsW, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S529_SALRD
cell division protein FtsW
Cell division protein FtsW, putative {ECO:0000313|EMBL:ABC43704.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_9_scaffold_1334_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13750..14835
DNA (1086bp) protein (362aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=24657410 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000255|HAMAP-Rule:MF_00033}; EC=2.4.1.227 {ECO:0000255|HAMAP-Rule:MF_00033};;
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
qs_9_scaffold_1334_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15224..16750
DNA (1527bp) protein (509aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344, ECO:0000313|EMBL:CBH23567.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bactero
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B2_SALRM
murC; UDP-N-acetylmuramate--L-alanine ligase
qs_9_scaffold_1334_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16794..17618
DNA (825bp) protein (275aa)
Cell division protein FtsQ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B3_SALRM
ftsQ; FtsQ protein
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qs_9_scaffold_1334_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17732..19006
DNA (1275bp) protein (425aa)
Cell division protein ftsA n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGK6_RHOM4
cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_9_scaffold_1334_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19276..20694
DNA (1419bp) protein (473aa)
Cell division protein FtsZ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B5_SALRM
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qs_9_scaffold_1334_19
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21080..21589)
DNA (510bp) protein (170aa)
PEGA domain-containing protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZZJ6_ORNRL
PEGA domain-containing protein
PEGA domain-containing protein {ECO:0000313|EMBL:AFL97130.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobac
qs_9_scaffold_1334_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21932..23239
DNA (1308bp) protein (436aa)
GTP-binding protein Der n=1 Tax=Salisaeta longa RepID=UPI0003B2F5CD
small GTP-binding protein
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Or
qs_9_scaffold_1334_21
unknown

Not on your lists

comp(23312..23491)
DNA (180bp) protein (60aa)

This feature has no annotations

qs_9_scaffold_1334_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(23788..25137)
DNA (1350bp) protein (450aa)
Alanine racemase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMQ7_9CHLR
Alanine racemase {ECO:0000313|EMBL:EFH87057.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DS
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
qs_9_scaffold_1334_23
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25326..26033)
DNA (708bp) protein (236aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2IW32_9PSED
ddl; D-alanyl-alanine synthetase A
Displaying 23 items

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