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qs_9_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_171_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..503)
DNA (501bp) protein (167aa)
UPF0753 protein SRU_2057 n=2 Tax=Salinibacter ruber RepID=Y2057_SALRD
hypothetical protein
UPF0753 protein SRM_02272 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_9_scaffold_171_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(662..2107)
DNA (1446bp) protein (482aa)
NADH dehydrogenase I chain L {ECO:0000313|EMBL:CBH25194.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBH25194.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
NADH dehydrogenase I chain L n=2 Tax=Salinibacter ruber RepID=D5HAY9_SALRM
nuoL; NADH dehydrogenase I subunit L
qs_9_scaffold_171_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2406..2783)
DNA (378bp) protein (126aa)
hypothetical protein
hypothetical protein id=24657993 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25195.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_171_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3043..3459
DNA (417bp) protein (139aa)
ATP synthase epsilon chain n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK68_RHOM4
ATP synthase F1 subunit epsilon
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
qs_9_scaffold_171_5
unknown

Not on your lists

3487..3636
DNA (150bp) protein (50aa)

This feature has no annotations

qs_9_scaffold_171_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3694..4872
DNA (1179bp) protein (393aa)
Metal-activated pyridoxal enzyme n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZU9_SALRD
metal-activated pyridoxal enzyme
Metal-activated pyridoxal enzyme {ECO:0000313|EMBL:ABC46041.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_9_scaffold_171_7
unknown

Not on your lists

comp(4991..6010)
DNA (1020bp) protein (340aa)

This feature has no annotations

qs_9_scaffold_171_8
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6476..8461)
DNA (1986bp) protein (662aa)
Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UY17_RHOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD71832.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
qs_9_scaffold_171_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8746..9150)
DNA (405bp) protein (135aa)
GatB/Yqey domain superfamily n=2 Tax=Salinibacter ruber RepID=Q2S1E8_SALRD
GatB/YqeY domain-containing protein
GatB/Yqey domain superfamily {ECO:0000313|EMBL:ABC46105.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_9_scaffold_171_10
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9519..11168)
DNA (1650bp) protein (550aa)
Heparan N-sulfatase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1X7_9PLAN
Heparan N-sulfatase {ECO:0000313|EMBL:EDL61502.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
sulfatase
qs_9_scaffold_171_11
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11260..14160)
DNA (2901bp) protein (967aa)
Alpha-L-rhamnosidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KR98_HALH1
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AHM62676.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgacea
alpha-L-rhamnosidase
qs_9_scaffold_171_12
unknown

Not on your lists

14232..14420
DNA (189bp) protein (63aa)

This feature has no annotations

qs_9_scaffold_171_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14527..17577)
DNA (3051bp) protein (1017aa)
Alpha-L-rhamnosidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFR0_RHOM4
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACY47587.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qs_9_scaffold_171_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17778..18290)
DNA (513bp) protein (171aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG98_RHOMR
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:AEN73299.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_9_scaffold_171_15
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18287..18694)
DNA (408bp) protein (136aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonoca
Putative a-galactosidase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21KC4_SACD2
Conserved putative secreted protein
qs_9_scaffold_171_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(19115..19915)
DNA (801bp) protein (267aa)
50S ribosomal protein L17 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY2_RHOM4
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_9_scaffold_171_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20086..21075)
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=3 Tax=Salinibacter ruber RepID=RPOA_SALRD
rpoA; DNA-directed RNA polymerase subunit alpha
qs_9_scaffold_171_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(21199..21801)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Salisaeta longa RepID=UPI0003B6340A
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_9_scaffold_171_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(21906..22313)
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=1 Tax=Salisaeta longa RepID=UPI0003B779FB
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBH24180.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_9_scaffold_171_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(22421..22804)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Salisaeta longa RepID=UPI0003B72DBC
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:CBH24179.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_9_scaffold_171_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23139..23357)
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=24658979 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_9_scaffold_171_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23423..24331)
DNA (909bp) protein (303aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase n=1 Tax=Salisaeta longa RepID=UPI0003B6D19B
qs_9_scaffold_171_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(24430..25752)
DNA (1323bp) protein (441aa)
preprotein translocase subunit SecY n=1 Tax=Salisaeta longa RepID=UPI0003B63FAD
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qs_9_scaffold_171_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(25848..26309)
DNA (462bp) protein (154aa)
50S ribosomal protein L15 n=1 Tax=Salisaeta longa RepID=UPI0003B514E2
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_9_scaffold_171_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(26551..27060)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Salisaeta longa RepID=UPI0003B39501
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_9_scaffold_171_26
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(27194..27514)
DNA (321bp) protein (107aa)
50S ribosomal protein L18 n=1 Tax=Salisaeta longa RepID=UPI0003B58E36
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU21000
50S ribosomal protein L18
qs_9_scaffold_171_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(27659..28216)
DNA (558bp) protein (186aa)
50S ribosomal protein L6 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGW9_RHOM4
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodo
qs_9_scaffold_171_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(28341..28742)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Salisaeta longa RepID=UPI0003B5AAE1
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_9_scaffold_171_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(28831..29100)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Salisaeta longa RepID=UPI0003B52839
rpS; 30S ribosomal protein S14
30S ribosomal protein S14; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;
qs_9_scaffold_171_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(29138..29905)
DNA (768bp) protein (256aa)
rplE; 50S ribosomal protein L5
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=24658970 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
Displaying items 1-30 of 44 in total

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