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qs_9_scaffold_4741

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_4741_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(616..1212)
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salisaeta longa RepID=UPI0003B5382B
5-formyltetrahydrofolate cyclo-ligase
qs_9_scaffold_4741_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1324..2826
DNA (1503bp) protein (501aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
qs_9_scaffold_4741_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3103..3858
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4069E
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_9_scaffold_4741_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4075..4593
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG4_RHOM4
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_9_scaffold_4741_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4590..5459
DNA (870bp) protein (290aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4C3CB
qs_9_scaffold_4741_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5691..6038
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG6_RHOM4
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_9_scaffold_4741_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6147..6995
DNA (849bp) protein (283aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=309807 species=
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9P1_SALRM
hypothetical protein
qs_9_scaffold_4741_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7053..7508
DNA (456bp) protein (152aa)
single-stranded DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B6935F
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_9_scaffold_4741_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7688..8332
DNA (645bp) protein (215aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG9_RHOM4
tyrosyl-tRNA synthetase
qs_9_scaffold_4741_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8329..8853
DNA (525bp) protein (175aa)
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=24659582 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
tyrS; tyrosyl-tRNA synthetase
qs_9_scaffold_4741_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8881..9222)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037BD0FE
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ACV47265.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_9_scaffold_4741_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9219..9602)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36440.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
qs_9_scaffold_4741_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9941..10477)
DNA (537bp) protein (179aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Salisaeta longa RepID=UPI0003B73777
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
qs_9_scaffold_4741_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10520..11263)
DNA (744bp) protein (248aa)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Salisaeta longa RepID=UPI0003B3377D
purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
Displaying 14 items

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