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qs_9_scaffold_1872

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1872_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..496
DNA (495bp) protein (165aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKC7_RHOM4
qs_9_scaffold_1872_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

666..1469
DNA (804bp) protein (268aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=762570 spec
5'-nucleotidase SurE n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SES4_RHOMR
multifunctional protein surE
qs_9_scaffold_1872_3
bacterium UASB270, Bacteria

Not on your lists

1504..2226
DNA (723bp) protein (241aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B08
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:GAK56401.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
phosphatase/phosphohexomutase HAD superfamily
qs_9_scaffold_1872_4
unknown

Not on your lists

comp(2167..2457)
DNA (291bp) protein (97aa)

This feature has no annotations

qs_9_scaffold_1872_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3104..4237)
DNA (1134bp) protein (378aa)
MscS Mechanosensitive ion channel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH87_RHOM4
mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACY47845.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
qs_9_scaffold_1872_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4364..5272)
DNA (909bp) protein (303aa)
bifunctional protein folD (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJF5_RHOMR
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_9_scaffold_1872_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5508..6497
DNA (990bp) protein (330aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:CBH24880.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
aspartate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B422B1
dapG; aspartate kinase
qs_9_scaffold_1872_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7023..7496
DNA (474bp) protein (158aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AEN73846.1}; EC=1.2.1.11 {ECO:0000313|EMBL:AEN73846.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
Aspartate-semialdehyde dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJH4_RHOMR
qs_9_scaffold_1872_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7533..8057
DNA (525bp) protein (175aa)
hypothetical protein
hypothetical protein id=24659795 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24966.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_1872_trna_1
unknown

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8211..8282
DNA (72bp)
transferRNA
qs_9_scaffold_1872_10
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8407..9282
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales;
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CVQ3_TRURR
glucose-1-phosphate thymidylyltransferase
qs_9_scaffold_1872_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

9466..10071
DNA (606bp) protein (202aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABG06027.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABG06027.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobac
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARF1_RUBXD
qs_9_scaffold_1872_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10308..10808
DNA (501bp) protein (167aa)
HNH endonuclease
HNH endonuclease domain-containing protein id=24659134 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HNH endonuclease {ECO:0000313|EMBL:CBH24297.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qs_9_scaffold_1872_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10898..11443
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK83_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73136.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_9_scaffold_1872_14
unknown

Not on your lists

comp(11654..12199)
DNA (546bp) protein (182aa)

This feature has no annotations

qs_9_scaffold_1872_15
unknown

Not on your lists

comp(12196..12717)
DNA (522bp) protein (174aa)

This feature has no annotations

qs_9_scaffold_1872_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12752..13318)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5EE34
Uncharacterized protein {ECO:0000313|EMBL:ETX09235.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
qs_9_scaffold_1872_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13408..13893)
DNA (486bp) protein (162aa)
glycosyl transferase n=1 Tax=Salisaeta longa RepID=UPI0003B3F296
glycosyl transferase-like protein
Glycosyl transferase-related protein {ECO:0000313|EMBL:ABC44067.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_9_scaffold_1872_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14126..15019)
DNA (894bp) protein (298aa)
Amidinotransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH6_RHOMR
amidinotransferase
Amidinotransferase {ECO:0000313|EMBL:AEN73672.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus S
qs_9_scaffold_1872_19
unknown

Not on your lists

comp(15094..16137)
DNA (1044bp) protein (348aa)

This feature has no annotations

qs_9_scaffold_1872_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16304..17302)
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H8F0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24305.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_1872_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17352..18383)
DNA (1032bp) protein (344aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F1_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH24306.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_9_scaffold_1872_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18596..19819)
DNA (1224bp) protein (408aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=762570 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH4_RHOMR
qs_9_scaffold_1872_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19809..20828)
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B662F1
GPD; glyceraldehyde 3-phosphate dehydrogenase
qs_9_scaffold_1872_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21161..21862
DNA (702bp) protein (234aa)
hypothetical protein id=24659145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide domain protein {ECO:0000313|EMBL:ACY48682.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothe
qs_9_scaffold_1872_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21953..23452
DNA (1500bp) protein (500aa)
dctD; C4-dicarboxylate transport transcriptional regulatory protein
dctD; C4-dicarboxylate transport transcriptional regulatory protein id=24659146 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
C4-dicarboxylate transport transcriptional regulatory protein {ECO:0000313|EMBL:ABC44250.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qs_9_scaffold_1872_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23716..24399
DNA (684bp) protein (228aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Ord
Phosphonate-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH0_RHOMR
qs_9_scaffold_1872_27
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(24968..26059)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E305_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11953.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
hypothetical protein
qs_9_scaffold_1872_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26229..26396)
DNA (168bp) protein (56aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIG4_RHOMR
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:AEN74440.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Displaying 29 items

View Taxonomy