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qs_9_scaffold_2154

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2154_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..542)
DNA (540bp) protein (180aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH dehydrogenase subunit D n=1 Tax=Salisaeta longa RepID=UPI0003B4F6B3
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa
qs_9_scaffold_2154_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(638..982)
DNA (345bp) protein (115aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; EC=1.6.99.5 {ECO:0000313|EMBL:CBH23392.1};; NADH dehydrogenase I subunit C {ECO
NADH dehydrogenase subunit C n=1 Tax=Salisaeta longa RepID=UPI0003B4A964
NADH-quinone oxidoreductase subunit C/D
qs_9_scaffold_2154_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1414..2022)
DNA (609bp) protein (203aa)
nuoB; NADH-quinone oxidoreductase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] id=24657245 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit B; EC=1.6.5.11;; NADH dehydrogenase I subunit B; NDH-1 subunit B; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
nuoB; NADH-quinone oxidoreductase subunit B
qs_9_scaffold_2154_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2245..2763)
DNA (519bp) protein (173aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHE0_RHOMR
NAD(P)H-quinone oxidoreductase subunit 3
qs_9_scaffold_2154_5
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2792..3439
DNA (648bp) protein (216aa)
NmrA family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CS94_TRURR
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADI13626.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 1
qs_9_scaffold_2154_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3643..5325
DNA (1683bp) protein (561aa)
NAD(+) synthase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=24657254 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NAD(+) synthase
NAD(+) synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:ABC43794.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_9_scaffold_2154_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5386..6048
DNA (663bp) protein (221aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Holliday junction DNA helicase RuvA n=1 Tax=Salisaeta longa RepID=UPI0003B74024
ruvA; Holliday junction DNA helicase RuvA
qs_9_scaffold_2154_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6968..8290
DNA (1323bp) protein (441aa)
GTP-binding protein TypA n=1 Tax=Salisaeta longa RepID=UPI0003B7BB04
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:AEN74323.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_9_scaffold_2154_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8426..8770
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HLN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88814.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_2154_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8905..9516)
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H608_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44272.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_2154_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9974..11275)
DNA (1302bp) protein (434aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBH24984.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(
seryl-tRNA synthase n=1 Tax=Salisaeta longa RepID=UPI0003B4AC01
serS; seryl-tRNA synthetase
qs_9_scaffold_2154_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11475..13151)
DNA (1677bp) protein (559aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ABC45452.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC45452.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
ATP-dependent DNA helicase RecQ n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5T6_SALRD
recQ; ATP-dependent DNA helicase RecQ
qs_9_scaffold_2154_13
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13493..14605)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXK9_TRURR
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADI14611.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain D
qs_9_scaffold_2154_14
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14911..15417
DNA (507bp) protein (169aa)
hypothetical protein id=24657760 bin=Salinibacter_ruber species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03667.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantia
qs_9_scaffold_2154_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15485..16603
DNA (1119bp) protein (373aa)
Putative ATPase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H606_SALRM
ATPase
Putative ATPase {ECO:0000313|EMBL:CBH23461.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
qs_9_scaffold_2154_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16810..17928
DNA (1119bp) protein (373aa)
Putative phosphodiesterase-nucleotide pyrophosphatase {ECO:0000313|EMBL:CBH25664.1}; EC=3.1.4.1 {ECO:0000313|EMBL:CBH25664.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. I
Putative phosphodiesterase-nucleotide pyrophosphatase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCA9_SALRM
phosphodiesterase-nucleotide pyrophosphatase
qs_9_scaffold_2154_17
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17974..19911)
DNA (1938bp) protein (646aa)
Redoxin domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XVX5_PEDHD
AhpC/TSA family protein Tax=GWA2_Ignavibacteria_54_16_curated
redoxin domain-containing protein
qs_9_scaffold_2154_18
RLO_RIF_OD1_05_38_22, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

20649..21122
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_05_38_22_curated
qs_9_scaffold_2154_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21195..22676)
DNA (1482bp) protein (494aa)
Glutamate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD96_RHOM4
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_9_scaffold_2154_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22967..23200
DNA (234bp) protein (78aa)
Na-K-Cl cotransporter, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0B7_SALRD
potE; Na-K-Cl cotransporter
Na-K-Cl cotransporter, putative {ECO:0000313|EMBL:ABC46217.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qs_9_scaffold_2154_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23320..24228)
DNA (909bp) protein (303aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H638_SALRM
phnP; metallo-beta-lactamase superfamily protein
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CBH23493.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_9_scaffold_2154_22
unknown

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comp(24218..24412)
DNA (195bp) protein (65aa)

This feature has no annotations

qs_9_scaffold_2154_23
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24892..25104
DNA (213bp) protein (71aa)
Membrane protein, TrkA-C domain pair-containing n=3 Tax=Bacteria RepID=D7AMD8_GEOSK
membrane protein
Potassium transporter TrkA {ECO:0000313|EMBL:AJY68541.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurr
Displaying 23 items

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