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qs_9_scaffold_2960

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2960_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..415
DNA (414bp) protein (138aa)
Putative zinc protease {ECO:0000313|EMBL:CBH24754.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24754.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Putative zinc protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P9_SALRM
zinc protease
qs_9_scaffold_2960_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(425..1105)
DNA (681bp) protein (227aa)
PspC domain family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S229_SALRD
PspC domain-containing protein
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qs_9_scaffold_2960_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1309..1911)
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P7_SALRM
5-formyltetrahydrofolate cyclo-ligase
qs_9_scaffold_2960_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2240..3625
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
qs_9_scaffold_2960_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3696..4349
DNA (654bp) protein (218aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=24659588 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBH24750.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_9_scaffold_2960_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4380..4973
DNA (594bp) protein (198aa)
Ribosome maturation factor RimM n=2 Tax=Salinibacter ruber RepID=RIMM_SALRD
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_9_scaffold_2960_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5172..5699
DNA (528bp) protein (176aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P3_SALRM
trmD; tRNA (guanine-N(1)-)-methyltransferase
qs_9_scaffold_2960_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5775..6131
DNA (357bp) protein (119aa)
rplS; 50S ribosomal protein L19
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=24659585 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_9_scaffold_2960_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6198..7013
DNA (816bp) protein (272aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_9_scaffold_2960_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7026..7436
DNA (411bp) protein (137aa)
smpB; SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=24659583 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_9_scaffold_2960_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8129..8668
DNA (540bp) protein (180aa)
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=24659582 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
tyrS; tyrosyl-tRNA synthetase
qs_9_scaffold_2960_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8710..9408)
DNA (699bp) protein (233aa)
lysyl endopeptidase
prpL; Lysyl endopeptidase id=24659581 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lysyl endopeptidase {ECO:0000313|EMBL:ABC44756.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
Displaying 12 items

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