ggKbase home page

qs_9_scaffold_3570

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_3570_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(242..853)
DNA (612bp) protein (204aa)
rplQ; 50S ribosomal protein L17
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=24658984 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_9_scaffold_3570_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(938..1924)
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:
rpoA; DNA-directed RNA polymerase subunit alpha
qs_9_scaffold_3570_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2038..2640)
DNA (603bp) protein (201aa)
rpsD; 30S ribosomal protein S4
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=24658982 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:CBH24181.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_9_scaffold_3570_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2731..3135)
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=2 Tax=Salinibacter ruber RepID=RS11_SALRD
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_9_scaffold_3570_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(3215..3598)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=2 Tax=Salinibacter ruber RepID=RS13_SALRD
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:CBH24179.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_9_scaffold_3570_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3715..3936)
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Salinibacter ruber RepID=IF1_SALRD
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_9_scaffold_3570_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3936..4526)
DNA (591bp) protein (197aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=2 Tax=Salinibacter ruber RepID=D5H822_SALRM
map; methionine aminopeptidase
qs_9_scaffold_3570_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4777..5274)
DNA (498bp) protein (166aa)
Suspect SCG annotation. See neighboring gene [qs_9_scaffold_3570_9].
secY; preprotein translocase subunit SecY
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=24658977 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qs_9_scaffold_3570_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(5234..6007)
DNA (774bp) protein (258aa)
Protein translocase subunit SecY n=2 Tax=Salinibacter ruber RepID=D5H821_SALRM
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qs_9_scaffold_3570_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(6069..6512)
DNA (444bp) protein (148aa)
rplO; 50S ribosomal protein L15
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=24658976 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
Displaying 10 items

View Taxonomy