ggKbase home page

qs_9_scaffold_674

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_674_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..1285
DNA (1284bp) protein (428aa)
Aminopeptidase N n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8Y6_SALRM
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:CBH24491.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qs_9_scaffold_674_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1665..2954)
DNA (1290bp) protein (430aa)
Type II secretion system protein E n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKK2_RHOM4
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACY48914.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qs_9_scaffold_674_3
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3114..4016)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Laceyella sacchari RepID=UPI0003B49DE9
Uncharacterized protein {ECO:0000313|EMBL:KIF27682.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
hypothetical protein
qs_9_scaffold_674_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(4043..4498)
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=1 Tax=Salisaeta longa RepID=UPI0003B78FC8
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503, ECO:0000313|EMBL:CBH24483.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_9_scaffold_674_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(4594..4809)
DNA (216bp) protein (72aa)
rpsR; 30S ribosomal protein S18
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=24659315 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_9_scaffold_674_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(4864..5283)
DNA (420bp) protein (140aa)
30S ribosomal protein S6 n=2 Tax=Salinibacter ruber RepID=Q2S2U2_SALRD
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_9_scaffold_674_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5591..6664)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B72844
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:CBH24480.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidet
qs_9_scaffold_674_8
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6937..7782
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PDR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA67669.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
qs_9_scaffold_674_9
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7878..8804
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BQ63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM82710.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
hypothetical protein
qs_9_scaffold_674_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9144..9611
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG74_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74051.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_9_scaffold_674_11
unknown

Not on your lists

9865..10563
DNA (699bp) protein (233aa)

This feature has no annotations

qs_9_scaffold_674_12
unknown

Not on your lists

comp(11778..12569)
DNA (792bp) protein (264aa)

This feature has no annotations

qs_9_scaffold_674_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13363..14283
DNA (921bp) protein (307aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensory transduction histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6U4_SALRM
ntrB; sensory transduction histidine kinase
qs_9_scaffold_674_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14429..16645
DNA (2217bp) protein (739aa)
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit {ECO:0000313|EMBL:CBH23588.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CBH23588.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6D3_SALRM
acoA_pdhA; 2-oxoisovalerate dehydrogenase, E1 component subunits alpha and beta
qs_9_scaffold_674_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16818..17282
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S017_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45648.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_9_scaffold_674_16
unknown

Not on your lists

comp(17213..17392)
DNA (180bp) protein (60aa)

This feature has no annotations

qs_9_scaffold_674_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17489..18574
DNA (1086bp) protein (362aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4E9_SALRD
lipA; lipoyl synthase
qs_9_scaffold_674_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18905..20194)
DNA (1290bp) protein (430aa)
rod shape-determining protein RodA n=1 Tax=Salisaeta longa RepID=UPI0003B3EA01
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AEN74147.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_9_scaffold_674_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20453..22318)
DNA (1866bp) protein (622aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 {ECO:0000313|EMBL:AEN74148.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEN74148.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Penicillin-binding protein 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI92_RHOMR
qs_9_scaffold_674_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22827..24647
DNA (1821bp) protein (607aa)
peptidase S9 n=1 Tax=Salisaeta longa RepID=UPI0003B376FD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25523.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 20 items

View Taxonomy