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qs_9_scaffold_2005

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2005_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(206..1132)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPK9_NATPD
hypothetical protein
GIDE domain protein {ECO:0000313|EMBL:CAI49941.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_9_scaffold_2005_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1405..2214)
DNA (810bp) protein (270aa)
dehydrogenase/reductase 10 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI49942.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI49942.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPK8_NATPD
qs_9_scaffold_2005_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2273..3850)
DNA (1578bp) protein (526aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N793_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA52520.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
AMP-dependent synthetase/ligase
qs_9_scaffold_2005_4
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3966..5102
DNA (1137bp) protein (379aa)
Acyl-CoA dehydrogenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IAV1_HALRX
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB15943.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qs_9_scaffold_2005_5
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5342..6517
DNA (1176bp) protein (392aa)
Serine protease inhibitor family protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAR4_9EURY
Serine protease inhibitor family protein {ECO:0000313|EMBL:ELZ80817.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbo
serine protease inhibitor (serpin family)
qs_9_scaffold_2005_6
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6622..8244
DNA (1623bp) protein (541aa)
Putative acid--CoA ligase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3TT09_9ACTO
Putative acid--CoA ligase {ECO:0000313|EMBL:GAC84721.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
acid--CoA ligase
qs_9_scaffold_2005_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8355..9083)
DNA (729bp) protein (243aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=662477 species="Archaea; Euryarchaeota; Ha
argB1; acetylglutamate kinase (EC:2.7.2.8)
Isopentenyl phosphate kinase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJ79_HALVA
qs_9_scaffold_2005_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9080..10069)
DNA (990bp) protein (330aa)
mvk; mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=26
Mevalonate kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL14_NATM8
qs_9_scaffold_2005_9
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10224..10760
DNA (537bp) protein (179aa)
NUDIX hydrolase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HMY2_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELZ85945.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
ADP-ribose pyrophosphatase
qs_9_scaffold_2005_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10835..11371
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y314_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36897.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_9_scaffold_2005_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11395..11775)
DNA (381bp) protein (127aa)
30S ribosomal protein S2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS2_NATPD
rps2P; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_9_scaffold_2005_12
unknown

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11832..12320
DNA (489bp) protein (163aa)

This feature has no annotations

qs_9_scaffold_2005_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12161..13195)
DNA (1035bp) protein (345aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=ENO_NATPD
qs_9_scaffold_2005_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13348..13521)
DNA (174bp) protein (58aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit K n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL15_NATM8
qs_9_scaffold_2005_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13518..13712)
DNA (195bp) protein (65aa)
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit N n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRN4_NATM8
qs_9_scaffold_2005_16
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13725..13874)
DNA (150bp) protein (50aa)
30S ribosomal protein S9 n=9 Tax=Haloarcula RepID=RS9_HALMA
rps9p; 30S ribosomal protein S9P
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
Displaying 16 items

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